Parental gene:

RPL34, ENSTBEG00000003574

Aliases:None
Description:ribosomal protein L34 [Source:HGNC Symbol;Acc:10340]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:scaffold_137485:123364..126130(+)


>ENSTBEG00000003574
ATGGTCCAGCGTCTGACCTACCGGCGTAGGCTTTCCTACAACACAGCCTCCAACAAGACTAGGCTGTCCCGAACCCCTGG
TAATAGGATCGTTTACCTTTATACCAAGAAGGTTGGGAAAGCACCCAAATCTGCATGTGGCGTGTGCCCGGGCCGACTCC
GAGGGGTTCGTGCTGTGAGACCGAAAGTTCTCATGAGGCTCTCTAAAACGAAGAAGCACGTCAGCAGGGCCTACGGCGGC
TCCATGTGTGCAAAATGCGTCCGCGACCGGATCAAGCGTGCTTTCCTTATAGAGCAGAAAATCGTCGTGAAAGTCTTGGC
ACAAGCACAGAGTCAGGCTAAT

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001758 ortholog_one2one 20 retrogenes
Bos taurus ENSBTAG00000014226 ortholog_one2one 13 retrogenes
Choloepus hoffmanni ENSCHOG00000009074 ortholog_one2one 10 retrogenes
Callithrix jacchus ENSCJAG00000015993 ortholog_one2many 4 retrogenes
Cavia porcellus ENSCPOG00000000802 ortholog_one2one 6 retrogenes
Dasypus novemcinctus ENSDNOG00000011179 ortholog_one2one 26 retrogenes
Equus caballus ENSECAG00000019719 ortholog_one2many 1 retrogene
Erinaceus europaeus ENSEEUG00000010390 ortholog_one2one 5 retrogenes
Echinops telfairi ENSETEG00000003715 ortholog_one2one 53 retrogenes
Felis catus ENSFCAG00000015502 ortholog_one2one 16 retrogenes
Homo sapiens ENSG00000109475 ortholog_one2one 33 retrogenes
Gorilla gorilla ENSGGOG00000007650 ortholog_one2one 32 retrogenes
Gadus morhua ENSGMOG00000009982 ortholog_one2one 1 retrogene
Loxodonta africana ENSLAFG00000032615 ortholog_one2one 6 retrogenes
Microcebus murinus ENSMICG00000002180 ortholog_one2one 32 retrogenes
Myotis lucifugus ENSMLUG00000000464 ortholog_one2many 4 retrogenes
Macaca mulatta ENSMMUG00000011901 ortholog_one2many 1 retrogene
Mustela putorius furo ENSMPUG00000008873 ortholog_one2many 17 retrogenes
Mus musculus ENSMUSG00000062006 ortholog_one2many 26 retrogenes
Nomascus leucogenys ENSNLEG00000012934 ortholog_one2many 20 retrogenes
Ornithorhynchus anatinus ENSOANG00000007856 ortholog_one2one 1 retrogene
Otolemur garnettii ENSOGAG00000006774 ortholog_one2many 1 retrogene
Ochotona princeps ENSOPRG00000001780 ortholog_one2one 11 retrogenes
Pongo abelii ENSPPYG00000014988 ortholog_one2many 18 retrogenes
Pan troglodytes ENSPTRG00000016353 ortholog_one2one 31 retrogenes
Pteropus vampyrus ENSPVAG00000005914 ortholog_one2one 9 retrogenes
Rattus norvegicus ENSRNOG00000016387 ortholog_one2many 36 retrogenes
Sorex araneus ENSSARG00000000177 ortholog_one2one 8 retrogenes
Sarcophilus harrisii ENSSHAG00000001357 possible_ortholog 1 retrogene
Sarcophilus harrisii ENSSHAG00000002052 ortholog_one2one 3 retrogenes
Sus scrofa ENSSSCG00000009146 ortholog_one2one 8 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000025964 ortholog_one2one 14 retrogenes
Tarsius syrichta ENSTSYG00000001781 ortholog_one2one 34 retrogenes
Tursiops truncatus ENSTTRG00000003443 ortholog_one2one 6 retrogenes
Vicugna pacos ENSVPAG00000005953 ortholog_one2one 9 retrogenes
Xenopus tropicalis ENSXETG00000021095 ortholog_one2many 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_74 78.07 98.25
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2. retro_tbel_213 70.11 75.44
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3. retro_tbel_279 70.43 98.25
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4. retro_tbel_335 84.88 74.56
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5. retro_tbel_657 71.43 72.81
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6. retro_tbel_901 78.26 98.25
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7. retro_tbel_974 58.04 92.11
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8. retro_tbel_983 62.65 70.18
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9. retro_tbel_1109 75.28 76.32
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10. retro_tbel_1298 67.62 89.47
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11. retro_tbel_1337 88.60 98.25
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12. retro_tbel_1532 82.89 65.79
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13. retro_tbel_1781 56.84 80.70
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14. retro_tbel_1857 87.38 90.35
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15. retro_tbel_1941 72.97 93.86
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16. retro_tbel_2162 67.54 98.25
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17. retro_tbel_2165 80.70 98.25
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18. retro_tbel_2372 89.72 92.11
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19. retro_tbel_2391 59.55 75.44
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20. retro_tbel_2601 62.16 64.04
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21. retro_tbel_3606 70.89 69.30
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22. retro_tbel_3984 73.68 79.82
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23. retro_tbel_4059 80.70 98.25
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24. retro_tbel_4398 72.22 61.40
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Download FASTA sequences of all ENSTBEG00000003574 retrocopies