Parental gene:

RPL34, ENSECAG00000019719

Aliases:None
Description:ribosomal protein L34 [Source:HGNC Symbol;Acc:10340]
Organism:Horse (Equus caballus)
Coordinates:2:116916195..116919490(-)


>ENSECAG00000019719
ATGGTCCAGCGTTTGACCTACCGCCGTAGGCTCTCCTACAACACAGCGTCCAACAAAACGAGGCTGTCCCGAACCCCTGG
GAATAGGATCGTTTACCTGTATACCAAGAAAGTTGGGAAAGCACCGAAGTCCGCGTGTGGCGTGTGCCCAGGCCGACTGC
GAGGCGTTCGTGCTGTGAGGCCTAAAGTTCTTATGAGATTGTCTAAAACGAAAAAACACGTCAGCAGGGCCTACGGAGGT
TCCATGTGTGCTAAATGTGTCCGCGACAGGATCAAGCGTGCTTTCCTTATTGAGGAGCAGAAAATCGTTGTGAAAGTGTT
GAAGGCCCAAGCACAGAGTCAGAAAGCTAAATAA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 191 .31 RPM
SRP021940_embryo 178 .11 RPM
SRP021940_cerebellum 130 .82 RPM
SRP021940_testis 114 .07 RPM
SRP021940_placental_villous 148 .33 RPM
SRP021940_articular_cartilage 288 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009074 possible_ortholog 10 retrogenes
retro_chof_1313, retro_chof_1474, retro_chof_184, retro_chof_2249, retro_chof_2258, retro_chof_2260, retro_chof_2291, retro_chof_2411, retro_chof_281, retro_chof_324,
Dasypus novemcinctus ENSDNOG00000011179 ortholog_one2many 26 retrogenes
retro_dnov_1172, retro_dnov_1775, retro_dnov_2020, retro_dnov_2025, retro_dnov_2079, retro_dnov_2127, retro_dnov_2137, retro_dnov_2275, retro_dnov_2385, retro_dnov_2501, retro_dnov_252, retro_dnov_262, retro_dnov_2627, retro_dnov_2651, retro_dnov_325, retro_dnov_339, retro_dnov_430, retro_dnov_553, retro_dnov_565, retro_dnov_59, retro_dnov_606, retro_dnov_635, retro_dnov_658, retro_dnov_862, retro_dnov_88, retro_dnov_978,
Echinops telfairi ENSETEG00000003715 possible_ortholog 53 retrogenes
retro_etel_106, retro_etel_107, retro_etel_1125, retro_etel_1140, retro_etel_1182, retro_etel_1187, retro_etel_1232, retro_etel_124, retro_etel_1303, retro_etel_1324, retro_etel_145, retro_etel_1483, retro_etel_1515, retro_etel_1545, retro_etel_1547, retro_etel_158, retro_etel_170, retro_etel_1745, retro_etel_1767, retro_etel_179, retro_etel_1795, retro_etel_1890, retro_etel_1967, retro_etel_1973, retro_etel_2066, retro_etel_2094, retro_etel_217, retro_etel_2191, retro_etel_273, retro_etel_274, retro_etel_299, retro_etel_327, retro_etel_344, retro_etel_362, retro_etel_380, retro_etel_388, retro_etel_416, retro_etel_418, retro_etel_429, retro_etel_464, retro_etel_494, retro_etel_533, retro_etel_726, retro_etel_74, retro_etel_756, retro_etel_759, retro_etel_774, retro_etel_863, retro_etel_870, retro_etel_914, retro_etel_927, retro_etel_938, retro_etel_974,
Gadus morhua ENSGMOG00000009982 ortholog_one2many 1 retrogene
retro_gmor_31,
Loxodonta africana ENSLAFG00000032615 ortholog_one2many 6 retrogenes
retro_lafr_1039, retro_lafr_1232, retro_lafr_182, retro_lafr_298, retro_lafr_306, retro_lafr_733,
Macropus eugenii ENSMEUG00000009361 ortholog_one2many 3 retrogenes
retro_meug_1012, retro_meug_1754, retro_meug_1775,
Myotis lucifugus ENSMLUG00000000464 possible_ortholog 4 retrogenes
retro_mluc_125, retro_mluc_1372, retro_mluc_1427, retro_mluc_1847,
Monodelphis domestica ENSMODG00000020601 ortholog_one2many 3 retrogenes
retro_mdom_1690, retro_mdom_774, retro_mdom_836,
Ornithorhynchus anatinus ENSOANG00000007856 possible_ortholog 1 retrogene
retro_oana_92,
Ochotona princeps ENSOPRG00000001780 possible_ortholog 11 retrogenes
retro_opri_1013, retro_opri_142, retro_opri_303, retro_opri_311, retro_opri_344, retro_opri_365, retro_opri_39, retro_opri_610, retro_opri_771, retro_opri_907, retro_opri_933,
Pelodiscus sinensis ENSPSIG00000003295 ortholog_one2many 1 retrogene
retro_psin_60,
Sarcophilus harrisii ENSSHAG00000001357 ortholog_many2many 1 retrogene
retro_shar_799,
Sarcophilus harrisii ENSSHAG00000002052 ortholog_many2many 3 retrogenes
retro_shar_131, retro_shar_324, retro_shar_419,
Sus scrofa ENSSSCG00000009146 ortholog_one2one 8 retrogenes
retro_sscr_1013, retro_sscr_1014, retro_sscr_1024, retro_sscr_522, retro_sscr_697, retro_sscr_703, retro_sscr_845, retro_sscr_929,
Tupaia belangeri ENSTBEG00000003574 ortholog_one2many 24 retrogenes
retro_tbel_1109, retro_tbel_1298, retro_tbel_1337, retro_tbel_1532, retro_tbel_1781, retro_tbel_1857, retro_tbel_1941, retro_tbel_213, retro_tbel_2162, retro_tbel_2165, retro_tbel_2372, retro_tbel_2391, retro_tbel_2601, retro_tbel_279, retro_tbel_335, retro_tbel_3606, retro_tbel_3984, retro_tbel_4059, retro_tbel_4398, retro_tbel_657, retro_tbel_74, retro_tbel_901, retro_tbel_974, retro_tbel_983,
Tursiops truncatus ENSTTRG00000003443 ortholog_one2one 6 retrogenes
retro_ttru_1667, retro_ttru_1831, retro_ttru_355, retro_ttru_710, retro_ttru_717, retro_ttru_821,
Xenopus tropicalis ENSXETG00000021095 ortholog_many2many 1 retrogene
retro_xtro_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_58 97.44 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSECAG00000019719 retrocopies