Parental gene:

COX7B, ENSPPYG00000020494

Aliases:None
Description:Cytochrome c oxidase subunit 7B, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q5R9K2]
Organism:Orangutan (Pongo abelii)
Coordinates:X:75455316..75461059(+)


>ENSPPYG00000020494
ATGTTTCCCTTGGTCAAAAACGCACTAAATCGTCTCCAAGTTCGAAGCATTCAGCAAACAATGGCAAGGCAGAGCCACCA
GAAACGTACACCTGATTTTCATGACAAATACGGTAATGCTGTATTAGCTAGTGGAGCCACTTTCTGTATTGTTACATGGA
CATATGTAGCAACACAAGTCGGAATAGAATGGAACCTGTCCCCTGTTGGCAGAGTTACCCCAAAGGAATGGAGGAATCAG
TAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 35 .28 RPM
SRP007412_cerebellum 65 .66 RPM
SRP007412_heart 213 .64 RPM
SRP007412_kidney 74 .08 RPM
SRP007412_liver 45 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006153 ortholog_one2one 6 retrogenes
retro_amel_25, retro_amel_313, retro_amel_459, retro_amel_484, retro_amel_669, retro_amel_807,
Bos taurus ENSBTAG00000047768 ortholog_one2many 3 retrogenes
retro_btau_214, retro_btau_22, retro_btau_59,
Callithrix jacchus ENSCJAG00000004045 ortholog_one2one 5 retrogenes
retro_cjac_2496, retro_cjac_2716, retro_cjac_345, retro_cjac_844, retro_cjac_973,
Cavia porcellus ENSCPOG00000014781 ortholog_one2one 2 retrogenes
retro_cpor_117, retro_cpor_252,
Echinops telfairi ENSETEG00000016695 ortholog_one2one 9 retrogenes
retro_etel_1049, retro_etel_1180, retro_etel_1651, retro_etel_1736, retro_etel_1805, retro_etel_2057, retro_etel_59, retro_etel_860, retro_etel_910,
Felis catus ENSFCAG00000023091 ortholog_one2one 2 retrogenes
retro_fcat_534, retro_fcat_590,
Homo sapiens ENSG00000131174 ortholog_one2one 4 retrogenes
retro_hsap_157, retro_hsap_16, retro_hsap_2305, retro_hsap_920,
Gorilla gorilla ENSGGOG00000023347 ortholog_one2one 9 retrogenes
retro_ggor_1539, retro_ggor_1617, retro_ggor_1634, retro_ggor_1707, retro_ggor_1779, retro_ggor_245, retro_ggor_443, retro_ggor_52, retro_ggor_579,
Loxodonta africana ENSLAFG00000022996 ortholog_one2one 4 retrogenes
retro_lafr_27, retro_lafr_555, retro_lafr_716, retro_lafr_927,
Microcebus murinus ENSMICG00000014521 ortholog_one2one 3 retrogenes
retro_mmur_256, retro_mmur_379, retro_mmur_56,
Myotis lucifugus ENSMLUG00000022443 ortholog_one2one 3 retrogenes
retro_mluc_1491, retro_mluc_2521, retro_mluc_277,
Macaca mulatta ENSMMUG00000015861 ortholog_one2one 5 retrogenes
retro_mmul_1120, retro_mmul_1941, retro_mmul_2400, retro_mmul_571, retro_mmul_800,
Mus musculus ENSMUSG00000031231 ortholog_one2one 5 retrogenes
retro_mmus_195, retro_mmus_2062, retro_mmus_2157, retro_mmus_2731, retro_mmus_502,
Pan troglodytes ENSPTRG00000022049 ortholog_one2one 9 retrogenes
retro_ptro_12, retro_ptro_1431, retro_ptro_1510, retro_ptro_153, retro_ptro_1629, retro_ptro_1714, retro_ptro_3014, retro_ptro_349, retro_ptro_760,
Pteropus vampyrus ENSPVAG00000003237 ortholog_one2one 2 retrogenes
retro_pvam_1, retro_pvam_1234,
Rattus norvegicus ENSRNOG00000028451 ortholog_one2one 5 retrogenes
retro_rnor_2351, retro_rnor_2387, retro_rnor_2959, retro_rnor_763, retro_rnor_999,
Sus scrofa ENSSSCG00000030970 ortholog_one2one 2 retrogenes
retro_sscr_938, retro_sscr_991,
Tursiops truncatus ENSTTRG00000004387 ortholog_one2one 3 retrogenes
retro_ttru_1097, retro_ttru_556, retro_ttru_7,
Vicugna pacos ENSVPAG00000001324 ortholog_one2one 2 retrogenes
retro_vpac_7, retro_vpac_87,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_22 73.75 100.00
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2. retro_pabe_270 71.25 100.00
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3. retro_pabe_465 85.00 100.00
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4. retro_pabe_587 66.67 98.75
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5. retro_pabe_793 52.50 96.25
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6. retro_pabe_836 64.56 98.75
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7. retro_pabe_1824 81.01 98.75
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8. retro_pabe_1904 83.75 100.00
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9. retro_pabe_2016 74.07 100.00
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10. retro_pabe_2017 78.05 100.00
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11. retro_pabe_2025 78.05 100.00
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12. retro_pabe_2026 74.07 100.00
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13. retro_pabe_2028 75.31 100.00
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14. retro_pabe_2029 75.00 98.75
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15. retro_pabe_2030 75.31 100.00
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16. retro_pabe_2034 73.17 100.00
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17. retro_pabe_2038 74.07 100.00
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18. retro_pabe_2121 70.00 100.00
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Download FASTA sequences of all ENSPPYG00000020494 retrocopies