Parental gene:

RPS21, ENSMODG00000016769

Aliases:None
Description:ribosomal protein S21 [Source:HGNC Symbol;Acc:10409]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:477393170..477395655(-)


>ENSMODG00000016769
ATGTACCATTCGGGGAGAGTGGAGCGACTACGCATTCCCGACGCCTGCACTCCTGAGGTCTCTCAAACTTCCAACATGCA
GAACGACGCCGGCGAGTTCGTGGATCTGTATGTGCCGCGGAAATGCTCTGCGAGCAACAGGATCATCGGAGCCAAGGATC
ACGCGTCCATCCAGATGAACGTGGCCGAGGTTGATAAGGTCACAGGCAGGTTCAATGGCCAATTTAAGACATATGCAATT
TGTGGAGCAATTCGTAGAATGGGAGAATCTGATGACTCTATTCTCCGGCTGGCAAAAAATGATGGTATTGTCTCAAAGAA
CTTCTAA

Library Parental gene expression (RPM)
SRP007412_brain 350 .08 RPM
SRP007412_cerebellum 372 .48 RPM
SRP007412_heart 714 .28 RPM
SRP007412_kidney 1154 .86 RPM
SRP007412_liver 1063 .87 RPM
SRP007412_testis 159 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017399 ortholog_one2many 2 retrogenes
retro_amel_1783, retro_amel_87,
Bos taurus ENSBTAG00000020795 ortholog_one2many 2 retrogenes
retro_btau_174, retro_btau_1780,
Canis familiaris ENSCAFG00000012676 ortholog_one2many 4 retrogenes
retro_cfam_1055, retro_cfam_1687, retro_cfam_1896, retro_cfam_28,
Callithrix jacchus ENSCJAG00000014195 ortholog_one2many 5 retrogenes
retro_cjac_2266, retro_cjac_2572, retro_cjac_629, retro_cjac_82, retro_cjac_884,
Cavia porcellus ENSCPOG00000001965 ortholog_one2one 4 retrogenes
retro_cpor_1156, retro_cpor_1268, retro_cpor_262, retro_cpor_584,
Homo sapiens ENSG00000171858 ortholog_one2one 6 retrogenes
retro_hsap_1179, retro_hsap_1883, retro_hsap_2300, retro_hsap_2949, retro_hsap_3026, retro_hsap_4303,
Gorilla gorilla ENSGGOG00000023745 possible_ortholog 7 retrogenes
retro_ggor_131, retro_ggor_1380, retro_ggor_1647, retro_ggor_2043, retro_ggor_2089, retro_ggor_2875, retro_ggor_917,
Latimeria chalumnae ENSLACG00000012753 ortholog_one2many 1 retrogene
retro_lcha_124,
Myotis lucifugus ENSMLUG00000000346 ortholog_one2one 3 retrogenes
retro_mluc_1009, retro_mluc_2136, retro_mluc_2282,
Mus musculus ENSMUSG00000039001 ortholog_one2one 11 retrogenes
retro_mmus_1100, retro_mmus_1324, retro_mmus_1482, retro_mmus_1510, retro_mmus_1688, retro_mmus_1837, retro_mmus_2039, retro_mmus_2071, retro_mmus_2243, retro_mmus_576, retro_mmus_992,
Ornithorhynchus anatinus ENSOANG00000003361 ortholog_one2one 2 retrogenes
retro_oana_102, retro_oana_107,
Otolemur garnettii ENSOGAG00000016673 ortholog_one2one 12 retrogenes
retro_ogar_1013, retro_ogar_1339, retro_ogar_1742, retro_ogar_2111, retro_ogar_2176, retro_ogar_2532, retro_ogar_2703, retro_ogar_2921, retro_ogar_3119, retro_ogar_3214, retro_ogar_3256, retro_ogar_719,
Pongo abelii ENSPPYG00000011205 ortholog_one2many 8 retrogenes
retro_pabe_1562, retro_pabe_157, retro_pabe_2446, retro_pabe_2505, retro_pabe_3503, retro_pabe_365, retro_pabe_710, retro_pabe_986,
Pan troglodytes ENSPTRG00000013708 ortholog_one2many 1 retrogene
retro_ptro_42,
Rattus norvegicus ENSRNOG00000006325 ortholog_one2many 2 retrogenes
retro_rnor_128, retro_rnor_172,
Sus scrofa ENSSSCG00000021825 ortholog_one2many 1 retrogene
retro_sscr_7,
Ictidomys tridecemlineatus ENSSTOG00000001029 ortholog_one2many 5 retrogenes
retro_itri_1027, retro_itri_1487, retro_itri_637, retro_itri_82, retro_itri_849,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_464 90.14 65.74
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Download FASTA sequences of all ENSMODG00000016769 retrocopies