Parental gene: | RPS21, ENSCPOG00000001965 |
| Aliases: | None |
| Description: | 40S ribosomal protein S21 [Source:UniProtKB/TrEMBL;Acc:H0UXF6] |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_119:1699315..1700257(-) |
>ENSCPOG00000001965
ATGCAGAACGACGCCGGCGAGTTCGTGGACTTGTACGTGCCGCGGAAATGCTCCGCCAGCAACCGCATCATTGGCGCCAA
GGACCACGCGTCCATCCAGATGAACGTGGCCGAGGTTGACAAGGTCACAGGCAGGTTTAATGGCCAGTTTAAAACCTACG
CGATCTGCGGCGCCATTCGCAGGATGGGTGAATCAGATGATTCCATTCTACGACTGGCCAAAGCTGATGGCATCGTCTCA
AAGAACTTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 57 .00 RPM |
| SRP017611_kidney | 62 .39 RPM |
| SRP017611_liver | 50 .01 RPM |
| SRP040447_lung | 157 .00 RPM |
| SRP040447_skeletal_muscle | 154 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017399 | possible_ortholog | 2 retrogenes | |
| Bos taurus | ENSBTAG00000020795 | possible_ortholog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000012676 | ortholog_one2many | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000014195 | possible_ortholog | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023745 | possible_ortholog | 7 retrogenes | |
| Latimeria chalumnae | ENSLACG00000012753 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016769 | ortholog_one2one | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000003361 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000011205 | possible_ortholog | 8 retrogenes | |
| Pan troglodytes | ENSPTRG00000013708 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000006325 | possible_ortholog | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000021825 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000001029 | possible_ortholog | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_262 | 78.05 | 98.80 | Please wait, loading  |
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| 2. | retro_cpor_584 | 70.59 | 79.52 | Please wait, loading |
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| 3. | retro_cpor_1156 | 58.33 | 100.00 | Please wait, loading |
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| 4. | retro_cpor_1268 | 62.65 | 98.80 | Please wait, loading |
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Download FASTA sequences of all ENSCPOG00000001965 retrocopies