Parental gene:

MMU.9675, ENSMMUG00000023807

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:6:40672705..40675138(-)


>ENSMMUG00000023807
TGGTCTCGGCTGCAGAAGCGAGATGACGAAGGGAACGTCATCGTTTGGAAAGCGAATAAGACGCACACATTGTGCCGCCG
CTGTGGCTCTAAGGCCTACCACCTTCAGAAGTCGACCTGTGGCAAATGTGGCTACCCTGCCAAGCGCAAGAGAAAGTATA
ACTGGAGTGCCAAGGCTAAAAGACGAAATACCACCGGAACTGGTCGAATGAGGCACCTAAAAATTGTATACCGCAGATTC
AGGCATGGATTCCGTGAAGGAACAACACCTAAACCCAAGAGGGCAGCTGTTGCAGCATCTAGTTCATCTTAA

Library Parental gene expression (RPM)
SRP007412_brain 20 .51 RPM
SRP007412_brain_prefrontal_cortex 109 .32 RPM
SRP007412_cerebellum 13 .50 RPM
SRP007412_heart 31 .97 RPM
SRP007412_kidney 22 .89 RPM
SRP007412_liver 55 .85 RPM
SRP007412_testis 13 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015424 ortholog_one2one 14 retrogenes
Bos taurus ENSBTAG00000005142 possible_ortholog 6 retrogenes
Callithrix jacchus ENSCJAG00000007388 possible_ortholog 10 retrogenes
Equus caballus ENSECAG00000026905 ortholog_one2one 5 retrogenes
Echinops telfairi ENSETEG00000003463 ortholog_one2one 23 retrogenes
Homo sapiens ENSG00000145592 possible_ortholog 21 retrogenes
Gorilla gorilla ENSGGOG00000003241 ortholog_one2one 19 retrogenes
Latimeria chalumnae ENSLACG00000002787 possible_ortholog 1 retrogene
Loxodonta africana ENSLAFG00000030052 possible_ortholog 13 retrogenes
Macropus eugenii ENSMEUG00000011938 ortholog_one2one 3 retrogenes
Myotis lucifugus ENSMLUG00000001565 possible_ortholog 10 retrogenes
Monodelphis domestica ENSMODG00000020301 possible_ortholog 3 retrogenes
Mus musculus ENSMUSG00000041841 possible_ortholog 28 retrogenes
Nomascus leucogenys ENSNLEG00000016508 possible_ortholog 4 retrogenes
Oryctolagus cuniculus ENSOCUG00000029674 possible_ortholog 11 retrogenes
Otolemur garnettii ENSOGAG00000034300 possible_ortholog 7 retrogenes
Procavia capensis ENSPCAG00000007672 ortholog_one2one 5 retrogenes
Pongo abelii ENSPPYG00000015422 possible_ortholog 26 retrogenes
Pan troglodytes ENSPTRG00000016822 possible_ortholog 20 retrogenes
Pteropus vampyrus ENSPVAG00000000921 ortholog_one2one 8 retrogenes
Rattus norvegicus ENSRNOG00000012538 possible_ortholog 6 retrogenes
Sarcophilus harrisii ENSSHAG00000013969 possible_ortholog 4 retrogenes
Sus scrofa ENSSSCG00000025883 possible_ortholog 5 retrogenes
Tarsius syrichta ENSTSYG00000006208 ortholog_one2one 21 retrogenes
Tursiops truncatus ENSTTRG00000010926 ortholog_one2one 7 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_206 94.85 100.00
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2. retro_mmul_329 97.94 100.00
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3. retro_mmul_976 50.47 100.00
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4. retro_mmul_997 63.92 100.00
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5. retro_mmul_1602 72.45 100.00
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6. retro_mmul_1672 69.00 95.15
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Download FASTA sequences of all ENSMMUG00000023807 retrocopies