Parental gene:

RPL37, ENSPTRG00000016822

Aliases:None
Description:Pan troglodytes ribosomal protein L37 (RPL37), mRNA. [Source:RefSeq mRNA;Acc:NM_001246471]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:5:74270621..74275391(+)


>ENSPTRG00000016822
ATGACGAAGGGAACGTCATCGTTTGGAAAGCGTCGCAATAAGACGCACACGTTGTGCCGCCGCTGTGGCTCTAAGGCCTA
CCACCTTCAGAAGTCGACCTGTGGCAAATGTGGCTACCCTGCCAAGCGCAAGAGAAAGTATAACTGGAGTGCCAAGGCTA
AAAGACGAAATACCACCGGAACTGGTCGAATGAGGCACCTAAAAATTGTATACCGCAGATTCAGGCATGGATTCCGTGAA
GGAACAACACCTAAACCCAAGAGGGCAGCTGTTGCAGCATCCAGTTCATCTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 186 .20 RPM
SRP007412_cerebellum 129 .27 RPM
SRP007412_heart 107 .00 RPM
SRP007412_kidney 357 .44 RPM
SRP007412_liver 210 .97 RPM
SRP007412_testis 46 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000145592 ortholog_one2one 21 retrogenes
retro_hsap_1277, retro_hsap_1424, retro_hsap_156, retro_hsap_1747, retro_hsap_1763, retro_hsap_2009, retro_hsap_2120, retro_hsap_2239, retro_hsap_2265, retro_hsap_2499, retro_hsap_2515, retro_hsap_2923, retro_hsap_343, retro_hsap_3610, retro_hsap_3901, retro_hsap_3958, retro_hsap_4685, retro_hsap_537, retro_hsap_795, retro_hsap_887, retro_hsap_953,
Latimeria chalumnae ENSLACG00000002787 possible_ortholog 1 retrogene
retro_lcha_6,
Loxodonta africana ENSLAFG00000030052 ortholog_one2one 13 retrogenes
retro_lafr_1101, retro_lafr_1123, retro_lafr_1125, retro_lafr_1136, retro_lafr_215, retro_lafr_374, retro_lafr_448, retro_lafr_507, retro_lafr_532, retro_lafr_619, retro_lafr_775, retro_lafr_985, retro_lafr_986,
Myotis lucifugus ENSMLUG00000001565 ortholog_one2one 10 retrogenes
retro_mluc_1037, retro_mluc_1334, retro_mluc_1441, retro_mluc_1651, retro_mluc_1897, retro_mluc_1917, retro_mluc_2006, retro_mluc_454, retro_mluc_738, retro_mluc_959,
Macaca mulatta ENSMMUG00000023807 possible_ortholog 6 retrogenes
retro_mmul_1602, retro_mmul_1672, retro_mmul_206, retro_mmul_329, retro_mmul_976, retro_mmul_997,
Monodelphis domestica ENSMODG00000020301 possible_ortholog 3 retrogenes
retro_mdom_130, retro_mdom_1843, retro_mdom_942,
Nomascus leucogenys ENSNLEG00000016508 ortholog_one2one 4 retrogenes
retro_nleu_1841, retro_nleu_2065, retro_nleu_2407, retro_nleu_77,
Otolemur garnettii ENSOGAG00000034300 ortholog_one2one 7 retrogenes
retro_ogar_127, retro_ogar_1308, retro_ogar_1662, retro_ogar_1667, retro_ogar_2670, retro_ogar_662, retro_ogar_76,
Pongo abelii ENSPPYG00000015422 ortholog_one2one 26 retrogenes
retro_pabe_1058, retro_pabe_1180, retro_pabe_1443, retro_pabe_1532, retro_pabe_1643, retro_pabe_1705, retro_pabe_1756, retro_pabe_1840, retro_pabe_1851, retro_pabe_1865, retro_pabe_1951, retro_pabe_1967, retro_pabe_1985, retro_pabe_212, retro_pabe_2403, retro_pabe_2432, retro_pabe_2962, retro_pabe_3180, retro_pabe_3260, retro_pabe_353, retro_pabe_3549, retro_pabe_3638, retro_pabe_466, retro_pabe_634, retro_pabe_707, retro_pabe_813,
Rattus norvegicus ENSRNOG00000012538 possible_ortholog 6 retrogenes
retro_rnor_171, retro_rnor_181, retro_rnor_220, retro_rnor_246, retro_rnor_321, retro_rnor_325,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_152 71.13 98.97
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2. retro_ptro_273 74.44 92.78
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3. retro_ptro_403 87.63 100.00
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4. retro_ptro_553 56.12 98.97
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5. retro_ptro_613 90.72 100.00
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6. retro_ptro_660 69.07 100.00
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7. retro_ptro_873 54.93 70.10
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8. retro_ptro_974 78.95 97.94
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9. retro_ptro_1208 86.36 68.04
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10. retro_ptro_1219 83.56 75.26
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11. retro_ptro_1338 89.69 100.00
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12. retro_ptro_1451 75.90 82.47
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13. retro_ptro_1460 73.47 100.00
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14. retro_ptro_1552 63.92 100.00
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15. retro_ptro_1584 79.27 84.54
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16. retro_ptro_1605 74.29 71.13
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17. retro_ptro_1978 72.16 100.00
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18. retro_ptro_2440 76.84 97.94
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19. retro_ptro_2654 76.77 100.00
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20. retro_ptro_2687 89.69 100.00
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Download FASTA sequences of all ENSPTRG00000016822 retrocopies