Parental gene: | TMEM167A, ENSDNOG00000003073 |
| Aliases: | None |
| Description: | transmembrane protein 167A [Source:HGNC Symbol;Acc:28330] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_5953:88002..96643(-) |
>ENSDNOG00000003073
TCTGCCATTTTCAATTTTCAGAGTCTGTTGACTGTAATCTTGCTGCTTATATGTACCTGTGCTTATATCCGATCCTTGGC
ACCCAGCCTCCTGGACAGAAATAAAACTGGACTGTTGGGTATATTTTGGAAGTGTGCCAGAATAGGTGAACGAAAAAGTC
CTTATGTTGCCGTATGCTGTATAGTGATGGCCTTCAGTATCCTGTTTGTACAGTAG
TCTGCCATTTTCAATTTTCAGAGTCTGTTGACTGTAATCTTGCTGCTTATATGTACCTGTGCTTATATCCGATCCTTGGC
ACCCAGCCTCCTGGACAGAAATAAAACTGGACTGTTGGGTATATTTTGGAAGTGTGCCAGAATAGGTGAACGAAAAAGTC
CTTATGTTGCCGTATGCTGTATAGTGATGGCCTTCAGTATCCTGTTTGTACAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 2 .92 RPM |
| SRP012922_cerebellum | 0 .41 RPM |
| SRP012922_heart | 0 .70 RPM |
| SRP012922_kidney | 1 .37 RPM |
| SRP012922_liver | 0 .77 RPM |
| SRP012922_lung | 1 .53 RPM |
| SRP012922_quadricep_muscle | 0 .87 RPM |
| SRP012922_spleen | 1 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000039591 | ortholog_one2one | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000029436 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000012009 | ortholog_one2one | 14 retrogenes | |
| Callithrix jacchus | ENSCJAG00000011238 | ortholog_one2many | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000026186 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000015882 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000026834 | ortholog_one2one | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000001023 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000016490 | ortholog_one2one | 11 retrogenes | |
| Felis catus | ENSFCAG00000012375 | ortholog_one2one | 4 retrogenes | |
| Homo sapiens | ENSG00000174695 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024191 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000009206 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000008924 | ortholog_one2one | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000025616 | ortholog_one2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000012422 | ortholog_one2one | 9 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009326 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009040 | ortholog_one2one | 4 retrogenes | |
| Ochotona princeps | ENSOPRG00000004516 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000017053 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000016686 | ortholog_one2one | 3 retrogenes | |
| Sorex araneus | ENSSARG00000005120 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000011984 | ortholog_one2one | 4 retrogenes | |
| Sus scrofa | ENSSSCG00000029173 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000002432 | ortholog_one2one | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000010018 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009033 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_202 | 76.06 | 98.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_319 | 81.43 | 95.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_356 | 68.06 | 98.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_448 | 84.72 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_550 | 83.33 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_806 | 57.75 | 90.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_dnov_924 | 65.75 | 98.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_dnov_948 | 83.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_dnov_979 | 69.70 | 92.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_dnov_1345 | 87.14 | 98.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_dnov_1443 | 67.16 | 91.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_dnov_1521 | 60.00 | 92.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_dnov_1612 | 87.32 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_dnov_1633 | 72.22 | 98.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_dnov_1648 | 76.19 | 87.32 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_dnov_1756 | 91.55 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_dnov_1852 | 94.37 | 98.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_dnov_1888 | 57.58 | 90.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_dnov_2118 | 81.16 | 95.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_dnov_2347 | 69.57 | 91.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_dnov_2628 | 83.33 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000003073 retrocopies