Parental gene:

ATP6V0E1, ENSCJAG00000019225

Aliases:None
Description:ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 [Source:HGNC Symbol;Acc:863]
Organism:Marmoset (Callithrix jacchus)
Coordinates:2:67139243..67196974(-)


>ENSCJAG00000019225
ATGGCGTATCACGGCCTCACGGTGCCTCTCATTGTGATGAGCGTGTTCTGGGGCTTCGTCGGCTTCTTGGTGCCTTGGTT
CATCCCTAAAGGTCCTAACCGGGGAGTTATCATTACCATGTTGGTGACCTGTTCAGTTTGCTGCTATCTCTTTTGGCTAA
TTGCAATTCTGGCCCAACTCAACCCTCTCTTTGGACCACAGCTGAAAAATGAAACCATCTGGTATCTGAAGTATCATTGG
CCTTGA

Library Parental gene expression (RPM)
SRP051959_spleen 32 .00 RPM
SRP051959_skeletal_muscle 9 .74 RPM
SRP051959_lymph_node 18 .86 RPM
SRP051959_lung 21 .28 RPM
SRP051959_liver 26 .86 RPM
SRP051959_kidney 36 .03 RPM
SRP051959_heart 17 .29 RPM
SRP051959_colon 17 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000015183 ortholog_one2one 1 retrogene
retro_acar_192,
Ailuropoda melanoleuca ENSAMEG00000011283 ortholog_one2one 1 retrogene
retro_amel_1124,
Bos taurus ENSBTAG00000015100 ortholog_one2one 4 retrogenes
retro_btau_1320, retro_btau_1428, retro_btau_369, retro_btau_653,
Canis familiaris ENSCAFG00000031898 ortholog_one2one 3 retrogenes
retro_cfam_1530, retro_cfam_1961, retro_cfam_1996,
Choloepus hoffmanni ENSCHOG00000004421 ortholog_one2one 9 retrogenes
retro_chof_1269, retro_chof_1600, retro_chof_1795, retro_chof_1856, retro_chof_2141, retro_chof_2270, retro_chof_2440, retro_chof_718, retro_chof_779,
Felis catus ENSFCAG00000031789 ortholog_one2one 1 retrogene
retro_fcat_1282,
Homo sapiens ENSG00000113732 ortholog_one2one 3 retrogenes
retro_hsap_2090, retro_hsap_2780, retro_hsap_3240,
Gorilla gorilla ENSGGOG00000006701 ortholog_one2one 3 retrogenes
retro_ggor_1632, retro_ggor_1937, retro_ggor_2206,
Macropus eugenii ENSMEUG00000008589 ortholog_one2one 3 retrogenes
retro_meug_1213, retro_meug_1393, retro_meug_530,
Myotis lucifugus ENSMLUG00000009804 ortholog_one2one 2 retrogenes
retro_mluc_1749, retro_mluc_628,
Macaca mulatta ENSMMUG00000013825 ortholog_one2one 2 retrogenes
retro_mmul_1446, retro_mmul_983,
Oryctolagus cuniculus ENSOCUG00000006174 ortholog_one2one 2 retrogenes
retro_ocun_1653, retro_ocun_732,
Otolemur garnettii ENSOGAG00000017071 ortholog_one2one 2 retrogenes
retro_ogar_1368, retro_ogar_529,
Ochotona princeps ENSOPRG00000000673 ortholog_one2one 1 retrogene
retro_opri_1191,
Pongo abelii ENSPPYG00000029669 ortholog_one2one 3 retrogenes
retro_pabe_2006, retro_pabe_2236, retro_pabe_2688,
Pan troglodytes ENSPTRG00000017538 ortholog_one2one 3 retrogenes
retro_ptro_1537, retro_ptro_1881, retro_ptro_2190,
Rattus norvegicus ENSRNOG00000003269 ortholog_one2one 1 retrogene
retro_rnor_1498,
Sarcophilus harrisii ENSSHAG00000007047 ortholog_one2one 1 retrogene
retro_shar_556,
Tupaia belangeri ENSTBEG00000005462 ortholog_one2one 1 retrogene
retro_tbel_3475,
Tarsius syrichta ENSTSYG00000006590 ortholog_one2one 5 retrogenes
retro_tsyr_1387, retro_tsyr_1422, retro_tsyr_1971, retro_tsyr_2020, retro_tsyr_547,
Tursiops truncatus ENSTTRG00000010626 ortholog_one2one 5 retrogenes
retro_ttru_1411, retro_ttru_1656, retro_ttru_1891, retro_ttru_250, retro_ttru_365,
Vicugna pacos ENSVPAG00000011996 ortholog_one2one 1 retrogene
retro_vpac_622,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1296 69.88 100.00
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2. retro_cjac_1616 71.23 88.89
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3. retro_cjac_1923 65.71 85.19
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4. retro_cjac_2873 95.12 100.00
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Download FASTA sequences of all ENSCJAG00000019225 retrocopies