Parental gene:

Tkt, ENSMUSG00000021957

Aliases:Tkt, p68
Description:transketolase [Source:MGI Symbol;Acc:MGI:105992]
Organism:Mouse (Mus musculus)
Coordinates:14:30548358..30574722(+)


>ENSMUSG00000021957
ATGGAAGGTTACCATAAGCCAGATCAGCAGAAGCTCCAGGCCCTGAAGGACACAGCCAATCGCCTGCGCATCAGCTCCAT
CCAGGCCACCACCGCGGCAGGCTCAGGCCACCCCACATCATGCTGCAGCGCTGCCGAGATCATGGCTGTCCTGTTTTTCC
ATACCATGCGTTACAAGGCCCTGGATCCCCGAAACCCTCACAATGATCGATTTGTGCTCTCTAAGGGCCATGCAGCTCCC
ATTTTATATGCAGTCTGGGCTGAAGCTGGCTTCCTACCCGAGGCCGAGCTGCTGAACCTGAGGAAGATCAGCTCTGACTT
GGACGGGCATCCTGTCCCGAAACAAGCCTTCACCGATGTGGCCACTGGCTCCCTGGGCCAGGGCCTGGGAGCTGCTTGCG
GGATGGCATACACAGGCAAATACTTTGACAAAGCCAGCTACCGAGTCTATTGCATGCTGGGAGACGGGGAGGTCTCCGAG
GGCTCCGTCTGGGAGGCCATGGCCTTTGCTGGAATTTACAAGCTGGACAACCTCGTTGCCATTTTTGACATCAACCGCCT
GGGCCAGAGCGACCCAGCCCCGCTGCAGCACCAGGTGGACATCTACCAGAAGCGCTGTGAGGCCTTTGGCTGGCACACCA
TCATCGTGGACGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGTCAGGCCAAGCACCAACCAACAGCCATCATTGCC
AAGACCTTCAAGGGCCGAGGGATCACAGGGATTGAAGACAAGGAGGCGTGGCACGGGAAGCCCCTCCCCAAAAACATGGC
CGAGCAGATTATCCAGGAGATTTACAGCCAGGTTCAGAGCAAAAAGAAGATCCTGGCCACGCCCCCTCAGGAGGATGCCC
CATCCGTGGACATTGCTAACATCCGAATGCCTACGCCACCCAGCTACAAAGTGGGGGACAAGATAGCCACCCGGAAGGCC
TATGGACTGGCCCTCGCTAAGCTGGGCCACGCCAGTGACCGTATCATTGCCCTGGATGGAGACACCAAGAATTCCACCTT
CTCGGAGCTCTTCAAAAAGGAGCACCCAGACCGGTTCATTGAGTGCTACATTGCCGAGCAAAACATGGTGAGCATTGCCG
TGGGCTGTGCCACACGTGACCGGACAGTGCCCTTCTGCAGTACTTTCGCGGCCTTCTTCACACGGGCCTTCGACCAGATT
CGCATGGCCGCCATCTCTGAGAGCAACATCAACCTCTGTGGCTCCCACTGTGGTGTGTCCATTGGGGAAGACGGGCCCTC
TCAGATGGCCCTCGAAGACCTGGCCATGTTCCGGTCAGTCCCCATGTCCACCGTCTTTTACCCAAGCGATGGAGTTGCAA
CAGAGAAGGCAGTGGAGTTAGCAGCCAACACAAAGGGCATTTGCTTCATCCGGACCAGCCGCCCAGAGAATGCCATTATT
TATAGCAACAATGAGGATTTCCAGGTCGGCCAAGCCAAGGTGGTCCTGAAGAGCAAGGATGACCAAGTGACAGTGATCGG
GGCTGGTGTAACTCTGCATGAGGCCTTGGCTGCTGCAGAGAGTCTAAAGAAAGATAAGATCAGCATCCGGGTGCTGGATC
CCTTCACTATCAAGCCCCTGGACAGGAAACTCATCCTAGACTCTGCCCGAGCAACCAAAGGCAGGATCCTCACCGTGGAG
GACCACTACTACGAAGGTGGCATAGGAGAGGCAGTGTCTGCTGCCGTAGTGGGTGAACCTGGAGTGACGGTCACTCGCCT
GGCTGTCAGCCAAGTACCACGAAGTGGCAAGCCAGCTGAGCTACTGAAGATGTTCGGTATTGACAAGGACGCCATTGTGC
AAGCTGTGAAAGGCCTTGTCACCAAGGGCTAG

Library Parental gene expression (RPM)
SRP007412_brain 106 .70 RPM
SRP007412_cerebellum 109 .90 RPM
SRP007412_heart 26 .87 RPM
SRP007412_kidney 135 .79 RPM
SRP007412_liver 101 .81 RPM
SRP007412_testis 17 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003758 ortholog_one2one 1 retrogene
retro_btau_176,
Callithrix jacchus ENSCJAG00000007253 ortholog_one2one 1 retrogene
retro_cjac_2128,
Cavia porcellus ENSCPOG00000000072 ortholog_one2one 1 retrogene
retro_cpor_45,
Dipodomys ordii ENSDORG00000001392 ortholog_one2one 1 retrogene
retro_dord_329,
Homo sapiens ENSG00000163931 ortholog_one2one 1 retrogene
retro_hsap_47,
Macropus eugenii ENSMEUG00000005312 ortholog_one2one 3 retrogenes
retro_meug_1397, retro_meug_160, retro_meug_796,
Myotis lucifugus ENSMLUG00000000943 ortholog_one2one 1 retrogene
retro_mluc_67,
Macaca mulatta ENSMMUG00000014433 ortholog_one2one 1 retrogene
retro_mmul_74,
Oryctolagus cuniculus ENSOCUG00000015904 ortholog_one2one 2 retrogenes
retro_ocun_319, retro_ocun_62,
Otolemur garnettii ENSOGAG00000016911 ortholog_one2one 1 retrogene
retro_ogar_5,
Ochotona princeps ENSOPRG00000009891 ortholog_one2one 1 retrogene
retro_opri_10,
Pan troglodytes ENSPTRG00000015024 ortholog_one2one 1 retrogene
retro_ptro_126,
Pteropus vampyrus ENSPVAG00000016283 ortholog_one2one 1 retrogene
retro_pvam_352,
Rattus norvegicus ENSRNOG00000016064 ortholog_one2many 1 retrogene
retro_rnor_146,
Sarcophilus harrisii ENSSHAG00000017349 ortholog_one2one 1 retrogene
retro_shar_827,
Sus scrofa ENSSSCG00000021408 ortholog_one2one 1 retrogene
retro_sscr_996,
Tupaia belangeri ENSTBEG00000012114 ortholog_one2one 1 retrogene
retro_tbel_3510,
Takifugu rubripes ENSTRUG00000003009 ortholog_one2many 1 retrogene
retro_trub_23,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_220 68.55 99.04
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Download FASTA sequences of all ENSMUSG00000021957 retrocopies