Common name: Fugu rubripes
Latin name: Takifugu rubripes
Genome assembly: FUGU4
All retrocopies: 43
Parental genes: 40

Summary: Number of retrocopies :
Conserved ORF: 36 ORF 7 ORF
Expressed retrocopies (EST): 1 EST 42 EST

# RetrogeneDB ID Identity Coverage ORF conservation Expression evidence
1. retro_trub_1 69.17 % 63.03 % ORF EST
2. retro_trub_2 75.86 % 100.00 % ORF EST
3. retro_trub_3 51.16 % 51.20 % ORF EST
4. retro_trub_4 92.81 % 100.00 % ORF EST
5. retro_trub_5 79.89 % 99.90 % ORF EST
6. retro_trub_6 63.80 % 96.58 % ORF EST
7. retro_trub_7 68.06 % 97.01 % ORF EST
8. retro_trub_8 59.04 % 67.48 % ORF EST
9. retro_trub_9 81.58 % 98.96 % ORF EST
10. retro_trub_10 62.57 % 98.35 % ORF EST
11. retro_trub_11 62.89 % 77.51 % ORF EST
12. retro_trub_12 53.78 % 61.98 % ORF EST
13. retro_trub_13 65.90 % 61.06 % ORF EST
14. retro_trub_14 65.65 % 96.09 % ORF EST
15. retro_trub_15 71.88 % 100.00 % ORF EST
16. retro_trub_16 63.89 % 62.20 % ORF EST
17. retro_trub_17 67.16 % 88.98 % ORF EST
18. retro_trub_18 74.50 % 100.00 % ORF EST
19. retro_trub_19 80.00 % 100.00 % ORF EST
20. retro_trub_20 80.58 % 77.88 % ORF EST
21. retro_trub_21 50.95 % 63.00 % ORF EST
22. retro_trub_22 68.00 % 93.02 % ORF EST
23. retro_trub_23 52.99 % 71.78 % ORF EST
24. retro_trub_24 78.50 % 98.62 % ORF EST
25. retro_trub_25 94.25 % 92.55 % ORF EST
26. retro_trub_26 87.13 % 95.28 % ORF EST
27. retro_trub_27 57.54 % 55.80 % ORF EST
28. retro_trub_29 69.21 % 76.75 % ORF EST
29. retro_trub_30 84.66 % 99.69 % ORF EST
30. retro_trub_31 63.23 % 83.21 % ORF EST
31. retro_trub_32 52.72 % 87.62 % ORF EST
32. retro_trub_33 80.23 % 51.09 % ORF EST
33. retro_trub_36 84.62 % 91.11 % ORF EST
34. retro_trub_37 74.96 % 61.63 % ORF EST
35. retro_trub_38 81.93 % 57.96 % ORF EST
36. retro_trub_39 74.84 % 100.00 % ORF EST
37. retro_trub_40 80.00 % 77.14 % ORF EST
38. retro_trub_41 78.32 % 82.18 % ORF EST
39. retro_trub_42 90.78 % 55.81 % ORF EST
40. retro_trub_43 59.33 % 57.69 % ORF EST
41. retro_trub_44 62.42 % 75.86 % ORF EST
42. retro_trub_45 59.56 % 53.24 % ORF EST
43. retro_trub_46 70.63 % 84.88 % ORF EST
# Ensembl ID Symbol Description
1. ENSTRUG00000005660 EIF4A2
2. ENSTRUG00000008276
3. ENSTRUG00000006345 FZD4
4. ENSTRUG00000005937 rab34a (1 of 2) RAB34, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041010-197]
5. ENSTRUG00000011858 TNNT2
6. ENSTRUG00000006239 DSE
7. ENSTRUG00000002387 lrrc30 leucine rich repeat containing 30 [Source:ZFIN;Acc:ZDB-GENE-050506-25]
8. ENSTRUG00000012022 FEM1C
9. ENSTRUG00000005726 b4galt6 (1 of 2) UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
10. ENSTRUG00000009962 cldnh claudin h [Source:ZFIN;Acc:ZDB-GENE-010328-8]
11. ENSTRUG00000016695 NAMPT
12. ENSTRUG00000014953 IFT52
13. ENSTRUG00000004543 RAC3
14. ENSTRUG00000005265 HSPA8
15. ENSTRUG00000017869 PCBD1
16. ENSTRUG00000005995 ube2g1a (2 of 2) ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
17. ENSTRUG00000018631 NPY8AR neuropeptide Y/peptide YY receptor [Source:RefSeq peptide;Acc:NP_001098073]
18. ENSTRUG00000007278 ccdc113 (2 of 2) coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
19. ENSTRUG00000003392 UBE2L3
20. ENSTRUG00000016201
21. ENSTRUG00000002327
22. ENSTRUG00000007797 MYHM2126-2
23. ENSTRUG00000003143 TCTN1
24. ENSTRUG00000012152 PURG
25. ENSTRUG00000009487 HOXB6A Homeobox protein Hox-B8a [Source:UniProtKB/Swiss-Prot;Acc:Q1KKY1]
26. ENSTRUG00000009953 KCNJ8
27. ENSTRUG00000011944 rhoab ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
28. ENSTRUG00000000444 TTC30A
29. ENSTRUG00000015197 elfn1b extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
30. ENSTRUG00000003783 SFPQ
31. ENSTRUG00000000131 SPAST
32. ENSTRUG00000014892 sumo3a SMT3 suppressor of mif two 3 homolog 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
33. ENSTRUG00000010617 TRU.1921 rod-like opsin [Source:RefSeq peptide;Acc:NP_001029021]
34. ENSTRUG00000018546 PITPNB
35. ENSTRUG00000002066
36. ENSTRUG00000008316 NXPH1 (1 of 2) neurexophilin 1 [Source:HGNC Symbol;Acc:20693]
37. ENSTRUG00000006565
38. ENSTRUG00000011365 OPN4
39. ENSTRUG00000003009 TKT (1 of 3) transketolase [Source:HGNC Symbol;Acc:11834]
40. ENSTRUG00000001873 SDHC
Retrogenes FASTA BED
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Parental genes FASTA BED
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