Parental gene:

DSE, ENSTRUG00000006239

Aliases:None
Description:None
Organism:Fugu rubripes (Takifugu rubripes)
Coordinates:scaffold_229:320421..327195(-)


>ENSTRUG00000006239
ATGAGGACCCACACCCGCGGGGCCCCCACTGTCTTCTTCATAAGTCTGCTGTGGCCACTGTTGGCAGCAGTGGACCTGGA
CTCCAGTGGAGGGATCCCCTTTATGGGCGGTAACTACGATGGACACCCCATGCTGTACTTCAGTCGGGGGGACGTGGAGG
AGATGCAGTATGCTGCGGCCGGGACCCACCGGGACATGGCGAAGAGGATCCGCGACGCCGGGGAAGCCATGCTGGAGCAC
CCTGAGGAGTACCTGCCCCCCTGGAGCCCTGCCGAGTTCACCGCTCGCTGGAACGAGGTTTATGGAAACAACCTTGGGGT
GCTGTCCATGTTTTGCCTGCTGTACCCACACAGAGCTGGAGCCCTGGACCTGGTCAAGGACTACATGGAGAGGATGGCGG
CTCAGCCTAGTTGGTTGGTCAAAGATGCTCCTTGGGATGAAGTTCCGTTGGCTCACTCGTTGGTTGGATTTGCCACCGCT
TACGACTTCATGCACGAGTACTTGAACAAGGATCAGCAGGAGCGTTTCCTCCAGGTGATCGGCAATGCTTCGCGCCTAAT
GTATGAGAAGTCTTACGTCAGAGGCTGGGGATTTCAGTACCTGCACAATCACCAGCCCACCAACTGCGTGGCCCTGCTCA
CTGGCAGTCTGGTTTACATGACACAAGGTTACCTACAGGAAGCTTACCTGTGGACCAAACAAGTGCTGTCTATCATGGAG
AAGTCCATGGTCCTCTTACAAGATGTGACAGATGGCTCACTGTATGAAGGCGTGGCCTATGGCACATACACCACGCGTTC
CCTATTCCAGTATATGTTCCTTGTTCAGCGTCACTTTGCCATTGGTCACTTCCGGCATCCTTGGCTCCTTAAACACTTTG
CTTTCTTGTACAGGACCATCCTACCAGGCTTTCAGCGGACCGTGGCCATAGCTGATTCCAATTACAACTGGTTCTATGGA
CCAGAGAGTCAGCTGGTTTTCTTGGACCGCTACGTGATGCGAAATGGCAGTGGGAACTGGCTGGCAGACTTGATTCATCA
GAACAGAGTGATGGAAGGCCCAGGACAGGCTGGGAAAGGCCAGCGCTGGTGTACTCTCCACACAGAGTTCATATGGTATG
ACCCAGGCCTAATTCCAAAGCCTCCATCAGATTTTGGAACATCCCAGCTTCACTACTTTGAGGACTGGGGCGTAGTGACC
TATGGCAGCGCTTTACCAGCTGACACCAATCGCACTTTTCTCTCCTTTAAATCAGGGAAACTGGGAGGACGTGCCATCTA
TGACATTGTCCATAGGAATAAGTACAAAGAGTGGGTGAAAGGGTGGAGGAACTTCAATGCTGGACACGAGCACCCTGACC
AGAACTCCTTTACTTTTGCACCCAACGGTGTCCCTTTCGTAGCAGAGGCCCTTTATGGTCCCAAGTACACATTGCTGAAC
AATGTGGTGTTGTTTGGCTCTTCTGTCTCAGATAGTTGTTTCAAGCCATGGGCTGGTCAAGTTACAGAAACTTGTGACTC
AAAGTGGTTGAAGTACAAGGTTGGGCAGGCAGCCGACACCCAGGGCAGAGTGGAAGCTGCTATGCGAAGAGAGGGAATGG
TCTTTATTCGCGGTGAAGGACATTCTGCTTATAATCCAGAGCTGAAAATCAGGAACTTCCAGAGGAACTTGCTCCTACTT
CATCCACAGCTCTTGCTCCTTGTGGATCACATCCACCTGCAAACTGACAGCCCAACCAGAGCAATGAGTGCCTTCTTTCA
CAACACAGATCTTCCATTCCAGGGTACTAGTGTAGATGGTGTACATGGAGCATTCATTACACATGGGCAGGATAAGTATA
AAATGTTCTGGTTGGATGACACGAGCTACAGTAACAAAGGAATGTTAGGTTACTGGAATTACCCTCGAGGGTATCCTTAT
AATGGTTCAAACTATGTGAATGTCACCATGCCTCTCAGGTATCCCCACACCAGGGTGGCTTACATTTTTTTTGGCCCAGG
CGTGGACGTACAGAGCTTCAGTGTGCGCAGCGATAACCAGAGAGTGGATATTTATCTGGCCACCAAAGATCACACATACA
CCATCTACCTGCTGACCACAGAGGAGATGAGCAAGCCTCTTTATGCCATGGTGCTACTTGACAAGAAAAAGGTTGTTTTC
GAGAAGTCGGTGGAAGCAGGAGCGGACAACTCACCCGATGAAGTTGAGGAATACGTCAACGTGATGGAGGACAACCTCCA
GCACGTCAAGCCCGTCTTCCAACAATTGGAGAGACACATTCTCGGGCGTGTTCTCAACACCGCCAGCATCCGCAGGACCG
CTGAGCGCCTACTTCAGTTCTCTGACAAGAGAAAGACGGATGAGGTCATCGAGAAGATGTTTGCTATGTCCAAAAAACAG
GGCAAGGGCAAAGGCGGCAAGAGACTGAACCTCGGAGAGAAACTCTCAGAGAGTTTTCCAGATATTTTTGCACAGATTGA
GGTGAATGAAAAGAAAGAGAGACAGAGGACATCAAAGCATACCTACACAGACACTCCAGAGGAGGGGGATCAAGACCTGC
GTGCATTTATGGATTATACAGACGGCCACAAAAATAAAAAAGGGGCCTTTGTCAAGGGTCGCAAATTTAAAGAAATTCAT
ATGGGGGTCAGAACAGAGAGCGAGTCCTTATCGAATACCTCCTCATACATCCGACTCTTTCTACTCCTCAACACGGCCAC
TTTCTTCCTGCTGCTTGCCATCATACTGACTCGTTTTCAGAGGGGTCGGAGTTTGCACACGCAGAGATGTTTCTACTTGA
TCCTCCTCATAGACTGCTTCATCCTGCTGTACCTCTACTCGTCGTGTTCCCACACAAAGTGCTAG

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000013791 ortholog_one2one 1 retrogene
retro_acar_15,
Callithrix jacchus ENSCJAG00000004530 ortholog_one2one 1 retrogene
retro_cjac_1174,
Homo sapiens ENSG00000111817 ortholog_one2one 1 retrogene
retro_hsap_4178,
Gorilla gorilla ENSGGOG00000026746 ortholog_one2one 2 retrogenes
retro_ggor_1419, retro_ggor_2802,
Nomascus leucogenys ENSNLEG00000013106 ortholog_one2one 1 retrogene
retro_nleu_2476,
Pongo abelii ENSPPYG00000016948 ortholog_one2one 2 retrogenes
retro_pabe_3418, retro_pabe_3517,
Pan troglodytes ENSPTRG00000018529 ortholog_one2one 1 retrogene
retro_ptro_2833,
Sorex araneus ENSSARG00000010799 ortholog_one2one 1 retrogene
retro_sara_560,
Xenopus tropicalis ENSXETG00000032776 ortholog_one2one 1 retrogene
retro_xtro_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_trub_32 52.72 87.62
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Download FASTA sequences of all ENSTRUG00000006239 retrocopies