Parental gene:

SFPQ, ENSTRUG00000003783

Aliases:None
Description:None
Organism:Fugu rubripes (Takifugu rubripes)
Coordinates:scaffold_45:55178..63336(-)


>ENSTRUG00000003783
AACAGACAACCGAATCAGGGACCACCGCAGACGCCACCGAAGCAACAAAACCAGCCGATCATCCCCCCGCCAAGTCCCGG
CCCAGCTCTAACAATGAAGGGCCCGATGGAGCAACAGAAAGCGACAGAAAAAGAGCAGGGAGCGATTAAACAGCAAACTC
CTGCACCCCCATCTACGATTCAATCGCCCCCCGCAAAGACCAACATTACATCTCCTCAACACCAGGAAAGCAAAAACCAA
GACCAGCAGCTCAAGAGCCCGATAGGAAATGCGAACGGACAACAACAAAAGCAGCCTCCACAAGCCAGCCCCAAGTCAAC
ACCGCAGCAGCCCATTCGACCGGGCCTACAGCAGCCTCTTCGACCGGGCCCGCAACAGGGCCAGCGACCTGGTCTGCAAC
AAGGCCAGCGACCTGGCCTGCAACAGGGCCAGCGATCAGGACAGCAACAGGGCCCGAGATTGGGTCCACAACAGGGACAG
CGATCGGGGCAGCAGCAAGGGCAGAAAACCGCTCCAATGGCGATGAAACGGGCAGATGGACAGGAGACAATGGACAATCC
TGCAGCCCAGGCGGAAGGGAGCCAGGCAAAGGAGTTTAAGGCTACGCTGTCCATGTTGCTTAAACCTGGTGAGAAGAGAT
ACACTCAACGATGCCGTCTTTTCATTGGCAACCTGCCTAACGACATAACAGAGGAAGCATTCAAGAAGCTTTTTGCAAAA
TATGGGGAGCCCAGCGAAGTGTTTATCAATAAAGGGAAAGGCTTTGGTTTCATCCGCTTGGAGTCTCGGGCACTTGCTGA
GATTGCAAAGGCAGAGTTGGATGACACTCCTATGAAAGGCAGACCACTCCGTGTGCGATTTGCCACGCACTCTGCAGCCC
TCTCTGTGAAGAACCTGTCTCCATTTGTTTCTAATGAGCTCCTTGAAGAGGCCTTCTCTCAATTTGGAATGGTTGAAAGA
GCGGTTGTAATTGTCGATGATCGTGGCCGTTCAACGGGCAAGGGGATTGTCGAGTTTGCGTCCAAACCAGCTGCCAGGAA
GGCCCTCGATCGGTGCAGCGAGGGTGTTTTCCTTCTTACCTGTTCGCCGCGGCCTGTTGTTGTAGAGCCTTTAGAGCAAT
TTGATGATGAAGATGGCCTCCCAGAGAAGCTTGCACAAAAGAATCCCCGATATCAAGCCGAGCGTGAGGAACCTCCCCGT
TTTGCTCGCCCAGGAACTTTTGAGTTTGAATACGCTAAGCGTTGGAAGTCGCTTGACGAAATGGAGAAGCAACAGAGGCA
GCAGGTGGAAAAAAACATGCAAGAAGCTCGGGAGAAGCTTGAGGCAGAGATGGAAGATGCCTACCACGAGCACCAAGCCA
ACTTGTTAAGACAAGACCTTCTAAGACGACAGGAGGAGTTGCGGCGTATGGAGGAACTGCACAGTCAAGAAATGCAGAAG
AGAAAGGAGCTGCAGTTAAGACAAGAAGAAGAGCGTCGGCGACGTGAAGAGGAAATGCTTCGGAAACGGGAGATGGAAGA
GCAGATGCGTCGCCAGCGTGAGGAGAACTACAGAATGGGAGGCTTTATGGACAGGGAGAGAGAAATGAGAATGAATTCAG
GTGGGGCCATGGGTTTGGGTGATATGTCCTTTGGTGCAGCTGGTCAGAAGTTCCCAATGGGTGGACTTGGCTTTGAAGGG
CAGCAAGGGATGGGATCATCTCCAGGAAACATGATGGGCAATGACATGCGCAATGAGCGCTTCTCCCAGGGGGGCCCTAG
GGGAATGGGTCCTGGCAACCCTGGTTATGGTAGGGTCCGTGAAGAATTTGACGGCCCCTCTAAGAAACCTCGTTTTTAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003595 ortholog_one2many 1 retrogene
retro_cfam_198,
Callithrix jacchus ENSCJAG00000001431 ortholog_one2many 4 retrogenes
retro_cjac_1073, retro_cjac_2542, retro_cjac_2697, retro_cjac_486,
Felis catus ENSFCAG00000031287 ortholog_one2one 1 retrogene
retro_fcat_1989,
Gasterosteus aculeatus ENSGACG00000002034 ortholog_one2one 1 retrogene
retro_gacu_13,
Gadus morhua ENSGMOG00000011950 ortholog_one2many 1 retrogene
retro_gmor_20,
Macropus eugenii ENSMEUG00000014082 ortholog_one2one 1 retrogene
retro_meug_164,
Oryctolagus cuniculus ENSOCUG00000001877 ortholog_one2one 1 retrogene
retro_ocun_1834,
Oreochromis niloticus ENSONIG00000017737 ortholog_one2one 1 retrogene
retro_onil_21,
Sarcophilus harrisii ENSSHAG00000016107 ortholog_one2many 1 retrogene
retro_shar_36,
Tetraodon nigroviridis ENSTNIG00000011331 ortholog_one2one 1 retrogene
retro_tnig_32,
Drosophila melanogaster FBgn0004227 ortholog_many2many 1 retrogene
retro_dmel_11,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_trub_8 59.04 67.48
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Download FASTA sequences of all ENSTRUG00000003783 retrocopies