Parental gene:

sfpq (2 of 2), ENSGMOG00000011950

Aliases:None
Description:splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
Organism:Cod (Gadus morhua)
Coordinates:GeneScaffold_4591:13954..24141(-)


>ENSGMOG00000011950
ATGTCTCGAGATAGATTCAATAGGAATCGCGGCGGAGGAATGAACAACTTTCAGCAACGCAGGGGTGGCGGCCCCGGTGG
CCCAATGCGAGGAGGACTGATGGGGAACCCACATTTCAGGAATCACCCTTTCGGGAACCAGAACCAGAACCGAGGCGGAC
CCATGATGAGTAACAACTTCAATAAGCCGCCGAACGGTAACCAGGGACTACACACCCCTCCGCAGAAGCCACAACAGCCC
CAGTCCACTCCGATCATCCCTCCTCCGTCACCAGGCCCGGCTCTCACGATGAAAGGCCCGATACAACAGCAGAAGGAGCA
ACCAACCACAACACCAGAACAGCCACAACAGAAACTAACGACCCCCGTACCCCAACCGAAGATCTCATCGCCTCCTCCGA
AACCGAACATTTCATCCCCTCCACCCAAGCCGAATCAGGAACTCAAAGCAACTTTATCGTTGCTTCTCAAACCCGGTGAG
AAGACCTACACGCAGCGATGCCGTCTGTTCATTGGTAACCTGCCCAACGATATCAGCGATGAGGAGTTCAAGAAACTGTT
TGCCAAGTATGGAGAGCCAAGCGAAGTCTTCATTAACAAGAACAAAGGTTTTGGATTCATTCGATTGGAGTCGAGAGCGC
TGGCAGAGATTGCTAAAGCCGAACTGGACGACACGCCCATGAAAGGCAGACCACTGCGTGTGCGATTCGCCACACACTCT
GCGGCCCTCTCAATCAAAAACCTTTCGCCCTTCGTCTCCAATGAGCTCTTGGAAGAGGCCTTCTCCCAGTTTGGCATGGT
GGAGAGGGCGGTCGTCATTGTCGACGACCGCGGCCGTTCCTCAGGCAAGGGCCTTGTCGAGTTCGCCTCCAAACCCGCGG
CCAGAAAGGCCCTGGACCGCTGCAACGAGGGCGTTTTCCTGCTCACAACTTCGCCGCGGCCAGTGGTTGTCGAGCCCCTG
GAACAGTACGATGACGAAGATGGCCTCCCAGAGAAGCTGGCCCAGAAGAACCCCAGATACCAAAAGGAGCGCGAGGAGCC
CCCCCGCTTCGCCCGGCCGGGGACCTTTGAGTTTGAGTACTCCAAGCGCTGGAAGTCCCTGGACGAGATGGAGAAGCAGC
AGAGGCAGCAAGTGGACAAGAACATGCGTGAGGCCCGCGAGAAGCTGGAGAGTGAGATGGAAGATGCCTTCCATGAGCAC
CAGGCTAACCTCCTCCGCCAAGACCTGCTGAGGAGACAGGAGGAGCTCCGGCGGATGGAGGAGATGCACAGCCAGGAGAT
GCTCAAGAGGAAGGAGATGCAGATCAGGCAGGAGGAGGAACGTCGCCGGCGAGAGGAGGAGATGATCCATAAGAGGGAGG
TGGAGGAGCAGATGAGGCGCCAGCGTGAGGAGAAGTACAGGGGCATGGGCAACTTCATGGAAAGCAGGGAACGCGATATG
AGAATGAATCAAGGTGGAGCCATGGGCCTGGCTGACATGCCTTTTGGCACTCCAAACCAGAAGTTCCCCATGGGTGGACT
GGGCTTTGAGGGACAGCAGGGTGGGATTGGAGGACCCTCTCCTGGAGGCATGATTCCCAACGAAATGCGCAATGAGCGCT
TCCCCCAGGGAGGTCCAAGGGGGATGGGTCCTGGTAACCCTGGGTTTGGTAGGGGACGCGAAGAGTTTGATGGACCTGCC
AAGAAGCCACGCTTTTAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003595 ortholog_many2many 1 retrogene
retro_cfam_198,
Callithrix jacchus ENSCJAG00000001431 ortholog_many2many 4 retrogenes
retro_cjac_1073, retro_cjac_2542, retro_cjac_2697, retro_cjac_486,
Felis catus ENSFCAG00000031287 ortholog_one2many 1 retrogene
retro_fcat_1989,
Gasterosteus aculeatus ENSGACG00000002034 ortholog_one2many 1 retrogene
retro_gacu_13,
Macropus eugenii ENSMEUG00000014082 ortholog_one2many 1 retrogene
retro_meug_164,
Oryctolagus cuniculus ENSOCUG00000001877 ortholog_one2many 1 retrogene
retro_ocun_1834,
Oreochromis niloticus ENSONIG00000017737 ortholog_one2many 1 retrogene
retro_onil_21,
Sarcophilus harrisii ENSSHAG00000016107 ortholog_many2many 1 retrogene
retro_shar_36,
Tetraodon nigroviridis ENSTNIG00000011331 ortholog_one2many 1 retrogene
retro_tnig_32,
Takifugu rubripes ENSTRUG00000003783 ortholog_one2many 1 retrogene
retro_trub_8,
Drosophila melanogaster FBgn0004227 ortholog_many2many 1 retrogene
retro_dmel_11,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_gmor_20 67.05 61.77
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Download FASTA sequences of all ENSGMOG00000011950 retrocopies