Common name: Stickleback
Latin name: Gasterosteus aculeatus
Genome assembly: BROADS1
All retrocopies: 22
Parental genes: 21

Summary: Number of retrocopies :
Conserved ORF: 15 ORF 7 ORF

# RetrogeneDB ID Identity Coverage ORF conservation
1. retro_gacu_1 56.69 % 90.70 % ORF
2. retro_gacu_2 51.93 % 51.44 % ORF
3. retro_gacu_3 71.31 % 96.47 % ORF
4. retro_gacu_4 69.00 % 97.69 % ORF
5. retro_gacu_5 51.92 % 95.40 % ORF
6. retro_gacu_6 50.52 % 88.89 % ORF
7. retro_gacu_7 69.89 % 85.44 % ORF
8. retro_gacu_8 72.35 % 89.53 % ORF
9. retro_gacu_9 79.78 % 94.82 % ORF
10. retro_gacu_10 60.27 % 86.67 % ORF
11. retro_gacu_11 51.71 % 84.01 % ORF
12. retro_gacu_12 70.23 % 99.84 % ORF
13. retro_gacu_13 61.02 % 60.39 % ORF
14. retro_gacu_14 50.14 % 96.66 % ORF
15. retro_gacu_15 90.21 % 92.33 % ORF
16. retro_gacu_18 55.77 % 51.00 % ORF
17. retro_gacu_19 65.82 % 60.38 % ORF
18. retro_gacu_20 61.14 % 97.44 % ORF
19. retro_gacu_21 93.93 % 98.42 % ORF
20. retro_gacu_22 94.59 % 75.84 % ORF
21. retro_gacu_23 57.93 % 53.73 % ORF
22. retro_gacu_24 60.26 % 75.00 % ORF
# Ensembl ID Symbol Description
1. ENSGACG00000018944 SSTR5 (1 of 2) somatostatin receptor 5 [Source:HGNC Symbol;Acc:11334]
2. ENSGACG00000005238 GRINA glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) [Source:HGNC Symbol;Acc:4589]
3. ENSGACG00000006126 zgc:85777 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
4. ENSGACG00000017629
5. ENSGACG00000002034 sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
6. ENSGACG00000004897 prmt1 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
7. ENSGACG00000019833
8. ENSGACG00000016502 elfn1b extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
9. ENSGACG00000001398
10. ENSGACG00000008233 P2RY2 (2 of 2) purinergic receptor P2Y, G-protein coupled, 2 [Source:HGNC Symbol;Acc:8541]
11. ENSGACG00000003664 KRBA2 KRAB-A domain containing 2 [Source:HGNC Symbol;Acc:26989]
12. ENSGACG00000003107 gtf3ab general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
13. ENSGACG00000005670 rhoab (1 of 2) ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
14. ENSGACG00000006261
15. ENSGACG00000013526 suv420h2 suppressor of variegation 4-20 homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-080523-2]
16. ENSGACG00000015271 LINGO3 (1 of 2) leucine rich repeat and Ig domain containing 3 [Source:HGNC Symbol;Acc:21206]
17. ENSGACG00000001115 kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 [Source:ZFIN;Acc:ZDB-GENE-060308-1]
18. ENSGACG00000003733 mc5ra melanocortin 5a receptor [Source:ZFIN;Acc:ZDB-GENE-021223-3]
19. ENSGACG00000019247 gpr22 G protein-coupled receptor 22 [Source:ZFIN;Acc:ZDB-GENE-041210-48]
20. ENSGACG00000000019 KCNS1 potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1 [Source:HGNC Symbol;Acc:6300]
21. ENSGACG00000007406 fem1c fem-1 homolog c (C.elegans) [Source:ZFIN;Acc:ZDB-GENE-031008-3]
Retrogenes FASTA BED
TSV (download all or selected columns from MySQL table)
Parental genes FASTA BED
TSV (download all or selected columns from MySQL table)