Common name: Cod
Latin name: Gadus morhua
Genome assembly: gadMor1
All retrocopies: 33
Parental genes: 28

Summary: Number of retrocopies :
Conserved ORF: 28 ORF 5 ORF
Expressed retrocopies (EST): 1 EST 32 EST

# RetrogeneDB ID Identity Coverage ORF conservation Expression evidence
1. retro_gmor_1 60.83 % 56.34 % ORF EST
2. retro_gmor_2 54.40 % 95.48 % ORF EST
3. retro_gmor_3 55.12 % 95.12 % ORF EST
4. retro_gmor_4 81.65 % 81.08 % ORF EST
5. retro_gmor_5 72.68 % 99.38 % ORF EST
6. retro_gmor_6 65.92 % 79.55 % ORF EST
7. retro_gmor_7 72.44 % 100.00 % ORF EST
8. retro_gmor_8 59.23 % 52.90 % ORF EST
9. retro_gmor_9 94.12 % 100.00 % ORF EST
10. retro_gmor_10 72.32 % 95.69 % ORF EST
11. retro_gmor_11 100.00 % 65.91 % ORF EST
12. retro_gmor_12 70.44 % 99.84 % ORF EST
13. retro_gmor_13 57.69 % 96.27 % ORF EST
14. retro_gmor_14 93.20 % 100.00 % ORF EST
15. retro_gmor_15 100.00 % 100.00 % ORF EST
16. retro_gmor_16 100.00 % 76.15 % ORF EST
17. retro_gmor_17 81.50 % 51.95 % ORF EST
18. retro_gmor_18 79.90 % 100.00 % ORF EST
19. retro_gmor_19 50.24 % 97.18 % ORF EST
20. retro_gmor_20 67.05 % 61.77 % ORF EST
21. retro_gmor_22 64.33 % 100.00 % ORF EST
22. retro_gmor_23 95.88 % 65.10 % ORF EST
23. retro_gmor_25 68.67 % 50.68 % ORF EST
24. retro_gmor_26 73.42 % 100.00 % ORF EST
25. retro_gmor_28 97.88 % 100.00 % ORF EST
26. retro_gmor_29 95.40 % 90.62 % ORF EST
27. retro_gmor_30 53.15 % 54.19 % ORF EST
28. retro_gmor_31 97.78 % 76.07 % ORF EST
29. retro_gmor_32 74.29 % 88.46 % ORF EST
30. retro_gmor_33 75.92 % 100.00 % ORF EST
31. retro_gmor_34 78.26 % 100.00 % ORF EST
32. retro_gmor_35 52.38 % 53.00 % ORF EST
33. retro_gmor_36 55.56 % 79.41 % ORF EST
# Ensembl ID Symbol Description
1. ENSGMOG00000003983
2. ENSGMOG00000015957
3. ENSGMOG00000010454 ugt5d1 (1 of 2) UDP glucuronosyltransferase 5 family, polypeptide D1 [Source:ZFIN;Acc:ZDB-GENE-091118-36]
4. ENSGMOG00000019455 rps12 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
5. ENSGMOG00000013755 RHO (2 of 2) rhodopsin [Source:HGNC Symbol;Acc:10012]
6. ENSGMOG00000012106
7. ENSGMOG00000001002 rpl9 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
8. ENSGMOG00000008188
9. ENSGMOG00000015840 HBB3 Hemoglobin beta 3 [Source:UniProtKB/TrEMBL;Acc:C8YNR1]
10. ENSGMOG00000012121 KCNJ10 potassium inwardly-rectifying channel, subfamily J, member 10 [Source:HGNC Symbol;Acc:6256]
11. ENSGMOG00000005806 fem1c fem-1 homolog c (C.elegans) [Source:ZFIN;Acc:ZDB-GENE-031008-3]
12. ENSGMOG00000014306 h3f3a H3 histone, family 3A [Source:ZFIN;Acc:ZDB-GENE-040426-1928]
13. ENSGMOG00000014266 fzd4 frizzled homolog 4 [Source:ZFIN;Acc:ZDB-GENE-990415-217]
14. ENSGMOG00000009508 kcnj11l potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
15. ENSGMOG00000009387
16. ENSGMOG00000005412
17. ENSGMOG00000011950 sfpq (2 of 2) splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
18. ENSGMOG00000012261
19. ENSGMOG00000017324 THAP9 (1 of 3) THAP domain containing 9 [Source:HGNC Symbol;Acc:23192]
20. ENSGMOG00000015654 POU3F3 (1 of 2) POU class 3 homeobox 3 [Source:HGNC Symbol;Acc:9216]
21. ENSGMOG00000018538 SSTR5 (2 of 2) somatostatin receptor 5 [Source:HGNC Symbol;Acc:11334]
22. ENSGMOG00000009342 calm3a calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
23. ENSGMOG00000009026
24. ENSGMOG00000012595 rps24 (1 of 2) ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
25. ENSGMOG00000005862 rps15a (2 of 2) ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
26. ENSGMOG00000012137 zgc:112425 (2 of 2) zgc:112425 [Source:ZFIN;Acc:ZDB-GENE-050417-329]
27. ENSGMOG00000009982 rpl34 ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-040426-1033]
28. ENSGMOG00000004077 rpl22l1 ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
Retrogenes FASTA BED
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Parental genes FASTA BED
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