RetrogeneDB ID: retro_gmor_5

Retrocopy location

• Organism: Cod (Gadus morhua)
• Coordinates: GeneScaffold_2769:37177..42967(-)
• Located in intron of: None

Retrocopy information

• Ensembl ID: ENSGMOG00000020224
• Aliases: None
• Status: KNOWN_PROTEIN_CODING

Parental gene information

• Parental gene symbol: None
• Ensembl ID: ENSGMOG00000009387
• Aliases: None
• Description: None

Sequence

>retro_gmor_5
ATGGGTGACGCGCTGATGGCCGAGTTTGGAAAGGCTGTGATCTATCTCAGGAAGTCTGACAAGGAGCGCCTGGAGGCCCA
AACCAGGGCTTTTGACATCAAAACGCAGTGCTTCGTCGTAGACGATAAAGTGGAATATGTCAAGGGGCAGATCCAAAGCA
AGGAAGGAGGGAAGGTTGTTGTAAAAAAGGAGGACGACACTACAGTGACAGTTCCAGAATCTGATGTCCATCCACAGAAC
CCGCCGAAGTATGATAAAATAGAGGACATGGCCATGTTCACCTTCCTCCACGAGCCTGCCGTGCTGTTCAACCTCAAGGA
GCGGTACGCTGCCTGGATGATCTACACCTACTCTGGTCTCTTCTGTGTCACCGTCAACCCCTACAAGTGGCTGCCAGTGT
ACGATTCAGAGGTGGTTGCGGCCTACAGAGGGAAGAAGAGGACCGAAGCTCCTCCTCACATCTTCTCCATCTCAGATAAC
GCTTACCAGTACATGCTCACTGACCGGGAGAACCAGTCGGTCCTCATCACTGGAGAATCCGGTGCTGGGAAAACCGTCAA
CACCAAGCGAGTCATCCAATACTTTGCCAGTATCGCTGCGGTTGGCGGTGCGGTCAAGAAGGATGCCAACAAAGGGACTC
TGGAGGATCAAATCATCCAGGCCAACCCTGCGCTAGAGGCCTTCGGTAATGCCAAAACCCTGAGGAATGACAACTCCTCT
CGTTTTGGAAAGTTCATCCGGATTCACTTCGGGAACAGCGGCAAGCTTAGCTCTGCAGACATCGAGACCTACCTGCTTGA
AAAGTCCAGAGTCACTTTCCAGCTGAAGTCTGAGAGGAACTATCACATATTCTTCCAGATCTTGTCCAATCAGAAGCCGG
AGCTGTTGGACATGCTGTTAATTACCAACAACCCCTACGATTACTCCTACATCTCCCAAGGAGAGGTAACCGTCGCCTCC
ATCAACGACTCTGAGGAGCTCATAGGCACTGATAGTGCGTTTGATGTCCTCGGCTTCACCCTGGAAGAAAAGATGGGGGT
GTACAAGCTGACTGGTGCCATCATGCACTATGGCAACATGAGGTTCAAGCAGAAGCAGCGCGAGGAGCAGGCAGAGTCAG
ACGGGACTGAAGCGGCTGATAAATCAGCATACCTCATGGGTCTAAACTCGGCGGATCTCATCAAAGGTCTCTGCCACCCT
AGGGTGAAGGTAGGGAATGAATATGTCACCAAAGGTCAAGGGGTGGATCAGGTCTACTACTCCCTTGGTGCGCTGGCTAA
GTCAGTGTATGAGAAGATGTTTAACTGGATGGTGGTGAGGATTAACCACTCCCTGGAAACCAAGCAGCACCGACAGCACT
TCATAGGAGTGCTGGACATTGCAGGTTTTGAGATCTTTGACTTCAACACCTTTGAGCAGCTCTGCATTAATTTCACAAAT
GAAAAACTGCAGCAGTTTTTCAATCACCACATGTTTGTCCTGGAACAGGAAGAGTACAAGAAGGAAGGCATTGATTGGGA
GTTCATTGACTTTGGGATGGATTTGCAGGCCTGCATTGACCTCATTGAGAAGCCCCTGGGCATCATGTCTATTCTGGAGG
AAGAGTGCATGTTCCCCAAAGCCAGTGACCAGACGTTTAAGTCTAAGCTCTATGACAATCACCTGGGCAAAAACAAAATG
TTTGAGAAGCCTAGACCTGCAAAGGGAAAAGCGGAGGCCCACTTTGCTCTGGTTCACTATGCTGGGACAGTCGACTACAA
CATTGGCAACTGGCTGGTGAAAAACAAAGATCCTTTGAATGAGACGGTGGTGGGGCTCTTCCAGAAGTCCTCCCTCAAGC
TTCTCAGTGTGCTCTTCTCCAGCTGTGCATCCGAAGCTGACAAGGGGGGCAAAGGCGCCAAAAAGAAAGGCTCCTCCTTC
CAGACAGTGTCAGCCCTTCACAGAGAAAACCTGAACAAGCTCATGTCCACCCTGAAAACCACACATCCACACTTTGTCCG
CTGTCTGATTCCGAATGAGAAGAAAACTCCAGGAATCATGGACAACTGCCTGGTGATGCATCAGCTCCGCTGTAACGGTG
TCCTGGAAGGCATCAGGATCTGCAGGAAGGGCTTCCCCAACAGGGTCCTGTACGGGGACTTCAAACAGCGGTACAGAATC
TTAAATGCTTCTGCCATTCCCGATGGACAATTCATGGACAACAAAAAGTGTGCAGAGAAGCTGTTGGGGTCGCTGGACAT
CGACCACACCCAGTACAGGTTTGGCCACACCAAGGTCTTCTTCAAGGCAGGTCTGCTAGGTACATTAGAGGAGATGCGAG
ATGAGCAACTGTCCCGCATTATCACAAGGATCCAAGCCAATGCCAGGGCAATTTTAATGAGAGCTGAGTTTGTCAAGCTT
GTGGAGCGCAGAGATGCTCTGTTGTTGATTCAGTGGAACCTTCGTTCTTTCCTGGGGGTGAAGAACTGGCCTTGGATGAA
GCTTTTCTTCAAGATCAAGCCCTTGCTGAAGAGCGCAGAGTCAGAGAAGGAGATGGCCAACATCAAGGATGAATTCAACA
CGATGAAACAAGCCTTGGAAAAATCGGAGGCCCGAAGGAAGGAACTAGAGGAGAAAATAGTGACGGTTCTCCAAGAGAAA
AATGACCTGACAATGCAGATTCAGTCCGAACAGGATACATTAACCGACGCGGAGGAGCGCTGCGAACAGCTCATCAAGAG
TAAGATTCAACAGGAAGCAAAGTTGAAAGAGATTACTGAAAGGATGGAGGATGAGGAAGAGATGAACGCTGATCTCACTG
CCAAAAGGCGGAAGCTTGAAGACGAATGCTCCGAGCTGAAAAAGGACATTGACGACCTTGAGCTGACATTAGCCAAGGTC
GAAAAGGAGAAACACGCCACTGAAAACAAGGTGAAGAATCTCACGGAGGAGCTGGCTTCTCAGGATGATAACATCCTGAA
GCTTAGCAAGGAGAAGAAAGCCTTACAAGAGGCCCACCAGCAGGCTCTGGACGACCTTCAGAGTGAAGAGGACAAGGCCA
ACACCCTCACCAAGGCCAAGGTCAAGTTAGAGCAGCAGGTCGATGACCTGGAGGGTTCCCTGGAACAAGAGAAGAAGGTC
AGGATGGATCTGGAACGTTCAAAGCGAAAGCTGGAAGGCGACCTGAAACTCAGTCAGGAGAGTTTGATGGACCTGGAGAA
CGACAAACAGCAACTGGAGGAGAAGCTGAAAAAGAAAGACTTTGAAACGTCGCAGTTGAACGGACGAATAGAAGATGAGC
AGGTGGTCAGCGTCCAGCTGCAGAAAAAGCTGAAGGAGAACCAGGCAAGGATTGAGGAGCTCGAGGAGGAGCTTGATGCT
GAGCGGGCAGCCCGGGCCAAAGTGGAAAAGCAGCGCTCCGATGTTTCCCGTGAGCTGGAGGACATCAGTGAGCGTCTAGA
AGAGGCCGGGGGCGCCACCTCGGCTCAAGTGGAGCTCAACAAGAAGAGAGATGCTGAGTTCCAGAAAGTCCGCAGGGAGT
TGGAGGAGTCTACACTTCAACACGAGGCCACTGCTGCAGCACTGAGGAAGAAGCATGCTGACAGCGTTGCTGAACTGGGT
GAACAGATTGACAACCTTCAGCGAGTCAAGCAGAAGCTGGAAAAGGAAAAAACTGAACTGAAACTGGAGCTGGATGACAT
ATCATCCAACATGGAGTGTGTGGTCAAAAACAAGTCCAATATTGAGAAGATATGCCGCTCAATGGAGGACAACATGAATG
AGTTCAAGAGCAAGTATGAGGAGGCTCAGAGGACGATCAATGACTTCACCACCCTGAGAGCCAAACTTCTCACTGAAAAC
GGGGAACTGGGACGTCAGCTGGAGGAGAAGGAGTGCCTGGTGTCACAGCTCACTAGGGGGAAGCTCTCCTACACCCAGCA
GCTGGAAGACCTCCGCAGACAGCTGGAGGAGGAGGTCAAGGCGAAGAACGCCCTTGCCCACGTGGTGCAGTCGGCTCGTC
ACGACTGTGACCTCCTGAGAGAACAGTTCGAGGAGGAGCAGGAGGCCAAGGCTGAGCTGCAGAGGGCGCTGTCCAAAGCC
AACATTGAGGTCTCAACCTGGCGGACCAAATACGAAACAGACGGGATCCAGCGCACAGAGGAGTTAGAAGAGGCCAAGAA
GAAGCTGGTCCAGCGTCTTCAGGAGGCGGAGGAAGCCATCGAGGCTGTGAACGCAAAGTGTTCCTCCCTGGAGAAGACCA
AACACCGCCTCCAAAATGAAATCGAAGATCTCATGTTGGACCTTGAGCGATCCAACGCAGCGTCCACAGCTCTCGACAAG
AAGCAGCGGTCGTTTGACAAAGTGATGGCCGAGTGGAAGCAGAAGTTTGAGGAGTCTCAATGTGAGCTGGAGGCGAGCCA
GAAGGAGGCTCGCTCTCTGAGCACAGAGCTCTTCAAACTAAAAAACGCCTATGAGGAGTCTCTGGATCAGCTAGAGACCA
TGAAGAGAGAGCACAAGATCCTCCAGGAAGAGATCTCTGACCTCACTGACCAGCTCGGCGAGGGCGGGAAAAACACCCAT
GAGCTGGAGAAACTCCGGAAGCAGCTGGAGCAGGAGAAGACGGAGCTTCAATCAGCACTCGAGGAGGCAGAGGGCTCTCT
TGAGCACGAGGAGGGCAAGATCCTCCGGGCCCAGCTGGAGTATAACCAGGTGAAGGCCGACATGGAACGGAAGGGTTCTG
AGAAGGATGAGGAGATGGATCAGGCCAAGAGAAACTACCAACGGATAATCGATTCCCTCCAGTCTTCTCTGGAATCTGAG
ACAAGGAGCCGCAACGAGGCGCTCCGCGTCAAGAAGAAGATGGAGGGTGACCTCAATGAAATGGAGGTCCAGCTGAGCAA
ATCCAACCGACAGGCGGCCGATGCACAGAAGCAGCTCAAAGTCATCCAGGCATACCTGAAAGATACCCAGATACATCTGG
ACGACGCAACCCATGGGAACGATGATCTCCGAGAGAACATCGCTCTGGTGGAACGGCGGAATAATCTGATCCAGGCGGAG
CTGGAGGAGCTGAGGTCAGCTCTGGAGCAGACGGAACGAGGCAGGAAGCTGGCGGAGCACGAGCTGACCGAGGCCACAGA
GCGCATGCAGCTCCTTCACTCACAGAACACCAGCCTCATCAACCAGAAGAAGAAGCACGAGGCGGATGTTCTCCACCTGC
AGTCTGAGGTGGAGGACGCCATACAGGAGAACCGCAACGCCGAAGAGAAGGCGAAGAAGGCCATCACTGACGCTGCCATG
ATGGCAGAGGAGCTGAAGAAAGAGCAGGACACCAGCGCCCACCTGGAGCGCATGAAAAAGAACATGGAGCAGACGATCAA
GGACCTGCAGCACCGCCTGGACGAAGCCGAGCAGGTCGCCATGAAAGGTGGGAAGAAGCAGCTTCAGAAGCTGGAGGGAC
GCATCAAGGAGCTGGAGAACGAGTTGGAGACGGAGCAGAAGAGAGGCACGGAGACCGTCAAAGGGGTGCGCAAGTACGAG
CGCCGCATCAAGGAGCTCACCTACCAGACGGAGGAGGACCGCAAGAACCTGGCCCGCGTGCAGGACCTGGTGGACAAGCT
GCAGCTCAAGGTCAAGTCCTACAAACGCTGTGCGGAGGAGGCCGAGGAGGCGTCCAACGTAAACATCGCCAAGCTCCGCA
AACTACAGCATGAGCTGGAGGAGGCGGAGGAGCGGGGGGACATCGCTGAGTCTCAGGTGAACAAGCTGCGGGCGAAGACC
AGGGACAGCTCCTCAAAGAAGGGTCTCGAC

Alignment

ORF - retro_gmor_5 Open Reading Frame is conserved.

Retrocopy - Parental Gene Alignment summary:

• Percent Identity: 72.68 %
• Parental protein coverage: 99.38 %
• Number of stop codons detected: 0
• Number of frameshifts detected: 0

Retrocopy - Parental Gene Alignment:

Parental  DGEMSVFGEAAQYLRKSEKERIEAQSRPFDSRGACFITEEKELYVKAEVQDRADGKVTAKTLDDRTLVVR
          D..M..FG.A..YLRKS.KER.EAQ.R.FD....CF....K..YVK...Q....GKV..K..DD.T..V.
Retrocopy DALMAEFGKAVIYLRKSDKERLEAQTRAFDIKTQCFVVDDKVEYVKGQIQSKEGGKVVVKKEDDTTVTVP

Parental  EDQVFPMNPPKYDKIEDMVMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYNPEVVQAY
          E..V.P.NPPKYDKIEDM.M.T.LHEPAVL.NLKERYAAWMIYTYSGLFCVTVNPYKWLPVY..EVV.AY
Retrocopy ESDVHPQNPPKYDKIEDMAMFTFLHEPAVLFNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYDSEVVAAY

Parental  RGKKRMEVPPHIFALSDNAYQLMLTDRVNQSILITGESGAGKTVNTKRVIQYFATIAVSGDKKKESSSKM
          RGKKR.E.PPHIF..SDNAYQ.MLTDR.NQS.LITGESGAGKTVNTKRVIQYFA.IA..G...K....K.
Retrocopy RGKKRTEAPPHIFSISDNAYQYMLTDRENQSVLITGESGAGKTVNTKRVIQYFASIAAVGGAVKKDANK-

Parental  KGTLEDQIIQANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGTTGKLSSADIETYLLEKSRVTFQLAAERS
          .GTLEDQIIQANP.LEAFGNAKT.RNDNSSRFGKFIRIHFG..GKLSSADIETYLLEKSRVTFQL..ER.
Retrocopy -GTLEDQIIQANPALEAFGNAKTLRNDNSSRFGKFIRIHFGNSGKLSSADIETYLLEKSRVTFQLKSERN

Parental  YHIFYQLTCNKKPELIDLLLITTNPFDFSFISQGEITVKSINDADELMATDEAIDILGFSAEEKAGIYKM
          YHIF.Q...N.KPEL.D.LLIT.NP.D.S.ISQGE.TV.SIND..EL..TD.A.D.LGF..EEK.G.YK.
Retrocopy YHIFFQILSNQKPELLDMLLITNNPYDYSYISQGEVTVASINDSEELIGTDSAFDVLGFTLEEKMGVYKL

Parental  VGAVMHFGNMRFKQKQREEQGEPDGTQEADKAAYLMGLNSADLLKNLCYPRVKVGNEYVTKGQNVQQVYN
          .GA.MH.GNMRFKQKQREEQ.E.DGT..ADK.AYLMGLNSADL.K.LC.PRVKVGNEYVTKGQ.V.QVY.
Retrocopy TGAIMHYGNMRFKQKQREEQAESDGTEAADKSAYLMGLNSADLIKGLCHPRVKVGNEYVTKGQGVDQVYY

Parental  SIGALAKSVYEKMFLWMVVRINQQLDTRQPRQHFIGVLDIAGFEIFDFNSLEQLCINFTNEKLQQFFNHH
          S.GALAKSVYEKMF.WMVVRIN..L.T.Q.RQHFIGVLDIAGFEIFDFN..EQLCINFTNEKLQQFFNHH
Retrocopy SLGALAKSVYEKMFNWMVVRINHSLETKQHRQHFIGVLDIAGFEIFDFNTFEQLCINFTNEKLQQFFNHH

Parental  MFVLEQEEYKKEGIDWEFIDFGMDLAACIELIEKPMGIFSILEEECMFPKSSDVSFKNKLYDQHLGKNGC
          MFVLEQEEYKKEGIDWEFIDFGMDL.ACI.LIEKP.GI.SILEEECMFPK.SD..FK.KLYD.HLGKN..
Retrocopy MFVLEQEEYKKEGIDWEFIDFGMDLQACIDLIEKPLGIMSILEEECMFPKASDQTFKSKLYDNHLGKNKM

Parental  FLKPKVVKGKPEAHFSLFHYAGTVDYNISGWLDKNKDPLNESVVQLYQKSSVRILSMLYASFSATDVGSG
          F.KP...KGK.EAHF.L.HYAGTVDYNI..WL.KNKDPLNE.VV.L.QKSS...LS.L..S..A.....G
Retrocopy FEKPRPAKGKAEAHFALVHYAGTVDYNIGNWLVKNKDPLNETVVGLFQKSSLKLLSVLFSS-CASEADKG

Parental  AKKGAKKKGSSFQTVSALFRENLGKLMTNLRTTHPHFVRCLIPNESKTPGVMENSLVIHQLRCNGVLEGI
          .K.GAKKKGSSFQTVSAL.RENL.KLM..L.TTHPHFVRCLIPNE.KTPG.M.N.LV.HQLRCNGVLEGI
Retrocopy GK-GAKKKGSSFQTVSALHRENLNKLMSTLKTTHPHFVRCLIPNEKKTPGIMDNCLVMHQLRCNGVLEGI

Parental  RICRKGFPSRILYGDFKQRYRILNASAVPEGQFMDNTKAAEKLLGSIDVDHTQYKFGHTKVFFKAGLLGA
          RICRKGFP.R.LYGDFKQRYRILNASA.P.GQFMDN.K.AEKLLGS.D.DHTQY.FGHTKVFFKAGLLG.
Retrocopy RICRKGFPNRVLYGDFKQRYRILNASAIPDGQFMDNKKCAEKLLGSLDIDHTQYRFGHTKVFFKAGLLGT

Parental  LEEMRDERLAHVVTSTQALCRAYVVRLEYQKMVSRSREAIYTVQYNIRSFMNVKHWPWMRLYFKLKPLLK
          LEEMRDE.L....T..QA..RA...R.E..K.V.R.R.A....Q.N.RSF..VK.WPWM.L.FK.KPLLK
Retrocopy LEEMRDEQLSRIITRIQANARAILMRAEFVKLVER-RDALLLIQWNLRSFLGVKNWPWMKLFFKIKPLLK

Parental  SAESEKEMVQMKEDFTKLKEDLAKSENKRREMEEKMVYFVQEKNDLVLQVQSEGDNLLDSEERCENLIQG
          SAESEKEM...K..F...K..L.KSE..R.E.EEK.V...QEKNDL..Q.QSE.D.L.D.EERCE.LI..
Retrocopy SAESEKEMANIKDEFNTMKQALEKSEARRKELEEKIVTVLQEKNDLTMQIQSEQDTLTDAEERCEQLIKS

Parental  KVQMEAKLKEVSERLEDEEEVNAELTAKKRKLEDESAELKKDIDDLELTLAKVEKEKHAIENKMKNLTDE
          K.Q.EAKLKE..ER.EDEEE.NA.LTAK.RKLEDE..ELKKDIDDLELTLAKVEKEKHA.ENK.KNLT.E
Retrocopy KIQQEAKLKEITERMEDEEEMNADLTAKRRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEE

Parental  IMSQDENLVKLTKEKKALQEAQQQTLDDLQSEEDKTNTLTKAKAKLEQQVDELEGSLEQDKKVRMDLERA
          ..SQD.N..KL.KEKKALQEA.QQ.LDDLQSEEDK.NTLTKAK.KLEQQVD.LEGSLEQ.KKVRMDLER.
Retrocopy LASQDDNILKLSKEKKALQEAHQQALDDLQSEEDKANTLTKAKVKLEQQVDDLEGSLEQEKKVRMDLERS

Parental  KRKLEGDLKLAQEMLMDMENATQQLDEKLKKKDFEVSQLQTKFEDEQSLGVQLQKNIKELQARIEELEEE
          KRKLEGDLKL.QE.LMD.EN..QQL.EKLKKKDFE.SQL....EDEQ...VQLQK..KE.QARIEELEEE
Retrocopy KRKLEGDLKLSQESLMDLENDKQQLEEKLKKKDFETSQLNGRIEDEQVVSVQLQKKLKENQARIEELEEE

Parental  MEAERSSRAKVEKQRSDLSRELEEISERLEEAGGATAAQVEVNKKRDAEFLKLRRDLEESSLQHDATSAT
          ..AER..RAKVEKQRSD.SRELE.ISERLEEAGGAT.AQVE.NKKRDAEF.K.RR.LEES.LQH.AT.A.
Retrocopy LDAERAARAKVEKQRSDVSRELEDISERLEEAGGATSAQVELNKKRDAEFQKVRRELEESTLQHEATAAA

Parental  LRKKHADSVAELGEHVDNLQRVKQKLEKEKSELKMEMDDLSSHMEAIAKSKINFEKLCRSLEDSLHEAKT
          LRKKHADSVAELGE..DNLQRVKQKLEKEK.ELK.E.DD.SS.ME...K.K.N.EK.CRS.ED...E.K.
Retrocopy LRKKHADSVAELGEQIDNLQRVKQKLEKEKTELKLELDDISSNMECVVKNKSNIEKICRSMEDNMNEFKS

Parental  KEEEHQKLINDLSSQKARLQTENAEMSHQLEERESLMTQLTRGRQAALQQMDELKRVNEEEVKAKSSLAH
          K.EE.Q..IND.....A.L.TEN.E...QLEE.E.L..QLTRG.....QQ...L.R..EEEVKAK..LAH
Retrocopy KYEEAQRTINDFTTLRAKLLTENGELGRQLEEKECLVSQLTRGKLSYTQQLEDLRRQLEEEVKAKNALAH

Parental  ALQSARHDCELLREQYEEEQEAKGELQRGLSKANSEVAQWRTKYETDAIQRTDELEEAKKKLALRLQEAE
          ..QSARHDC.LLREQ.EEEQEAK.ELQR.LSKAN.EV..WRTKYETD.IQRT.ELEEAKKKL..RLQEAE
Retrocopy VVQSARHDCDLLREQFEEEQEAKAELQRALSKANIEVSTWRTKYETDGIQRTEELEEAKKKLVQRLQEAE

Parental  EAMEAMNSKCSSIEKTKQRLQGEVEDLMLDMERSNAGASALDKKQRNFDKVLSEWKQKHEEGQTELESAL
          EA.EA.N.KCSS.EKTK.RLQ.E.EDLMLD.ERSNA...ALDKKQR.FDKV..EWKQK.EE.Q.ELE...
Retrocopy EAIEAVNAKCSSLEKTKHRLQNEIEDLMLDLERSNAASTALDKKQRSFDKVMAEWKQKFEESQCELEASQ

Parental  KEARCLGTENFKMRNAYEEAHENLEVLRRENKNLQEEIMDLTEQLGETGRTMHELEKSKKQTDVEKTEAQ
          KEAR.L.TE.FK..NAYEE....LE...RE.K.LQEEI.DLT.QLGE.G...HELEK..KQ...EKTE.Q
Retrocopy KEARSLSTELFKLKNAYEESLDQLETMKREHKILQEEISDLTDQLGEGGKNTHELEKLRKQLEQEKTELQ

Parental  TALEEAEATLEHEESKILRVQLELNQLKAEVDKKVSEKDEEMEQLKRSGQRLADSMQNTLDAEFRSRNDA
          .ALEEAE..LEHEE.KILR.QLE.NQ.KA....K.SEKDEEM.Q.KR..QR..DS.Q..L..E.RSRN.A
Retrocopy SALEEAEGSLEHEEGKILRAQLEYNQVKADMERKGSEKDEEMDQAKRNYQRIIDSLQSSLESETRSRNEA

Parental  LRVKKKMEADLNEMEMQLSHASRQASEAQKQLKNVQVQLKEVQVHLEDSLKESEDMKEQVALSERRSNLV
          LRVKKKME.DLNEME.QLS...RQA..AQKQLK..Q..LK..Q.HL.D......D..E..AL.ERR.NL.
Retrocopy LRVKKKMEGDLNEMEVQLSKSNRQAADAQKQLKVIQAYLKDTQIHLDDATHGNDDLRENIALVERRNNLI

Parental  QAELEETRGAVEQIERSRKVAEQELLDATERAQLLHSQNTSLINSRKKLDAELTQIQTGMEDSVQEARNA
          QAELEE.R.A.EQ.ER.RK.AE.EL..ATER.QLLHSQNTSLIN..KK..A.....Q...ED..QE.RNA
Retrocopy QAELEELRSALEQTERGRKLAEHELTEATERMQLLHSQNTSLINQKKKHEADVLHLQSEVEDAIQENRNA

Parental  EEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEVTVKDLQQRLDEAENLALKGGKKQLQKLETRVRE
          EEKAKKAITDAAMMAEELKKEQDTSAHLERMKKN.E.T.KDLQ.RLDEAE..A.KGGKKQLQKLE.R..E
Retrocopy EEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQVAMKGGKKQLQKLEGRIKE

Parental  LENELEAEQRHAMEAVKGVRKYERRIKELSYQSEEDKKNMTRLQELVDKLQMKVKAYKRQSEEAEEQANS
          LENELE.EQ....E.VKGVRKYERRIKEL.YQ.EED.KN..R.Q.LVDKLQ.KVK.YKR..EEAEE..N.
Retrocopy LENELETEQKRGTETVKGVRKYERRIKELTYQTEEDRKNLARVQDLVDKLQLKVKSYKRCAEEAEEASNV

Parental  SMARLRKVQHELEEAGERADIAESQLNKMRAKSRD
          ..A.LRK.QHELEEA.ER.DIAESQ.NK.RAK.RD
Retrocopy NIAKLRKLQHELEEAEERGDIAESQVNKLRAKTRD

Legend:

• *: Stop codon
• >: Forward frameshift by one nucleotide
• <: Reverse frameshift by one nucleotide

Expression

RNA-Seq

Gadus morhua was not studied using RNA-Seq expression data.

ChIP-Seq

Gadus morhua was not studied using ChIP-Seq data.

EST

No EST(s) were mapped for retro_gmor_5 retrocopy.

TSS

Gadus morhua was not studied using FANTOM5 data.

Lab

retro_gmor_5 was not experimentally validated.

Homology

Retrocopy orthology:

Gadus morhua does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to help section.

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Parental genes homology:

Parental genes homology involve 6 parental genes, and 6 retrocopies.

Species	Parental gene accession	Retrocopies number
Danio rerio	ENSDARG00000071430	1 retrocopy	retro_drer_2,
Gadus morhua	ENSGMOG00000009387	1 retrocopy	retro_gmor_5 ,
Oreochromis niloticus	ENSONIG00000008086	1 retrocopy	retro_onil_30,
Oryzias latipes	ENSORLG00000013217	1 retrocopy	retro_olat_17,
Tetraodon nigroviridis	ENSTNIG00000003838	1 retrocopy	retro_tnig_26,
Takifugu rubripes	ENSTRUG00000007797	1 retrocopy	retro_trub_5,