Parental gene:

ENSMMUG00000003505

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:X:42259161..42279499(-)


>ENSMMUG00000003505
ATGGCGACCCGGAACCCCCCTCCCCAAGAATATGAAAGTGATGACGACTCTTATGAAGTGTTGGATTTAACTGAGTATGC
AAGAAGACACCAGTGGTGGAATCGAGTGTTTGGCCACAGTTCGGGACCTATGGTAGAAAAATACTCAGTAGCTACCCAGA
TTGTAATGGGTGGCGTTACTGGCTGCTGTAGGCATATATTTTTTCAAAAATATCGTTCCTTAAAGATCAAATATACTGGC
AAAGCTTTTATTCTAATGCAGATTGCTAGTCATAGTGGCTATGTGCAGATTGACTGGAAGAGAGTTGAAAAAGATGTAAA
TAAAGCAAAAAGACAGATTAAGAAACGAGCGAACAAAGCAGCACCTGAAATCAACAATTTAATTGAAGAAGCAACAGAAT
TTATCAAGCAGAACATTGTGATATCCAGTGGATTTGTGGGAGGATTTTTGCTCGGACTTGCATCTTAA

Library Parental gene expression (RPM)
SRP007412_brain 2 .80 RPM
SRP007412_brain_prefrontal_cortex 3 .33 RPM
SRP007412_cerebellum 2 .91 RPM
SRP007412_heart 3 .95 RPM
SRP007412_kidney 2 .82 RPM
SRP007412_liver 0 .44 RPM
SRP007412_testis 0 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010258 possible_ortholog 3 retrogenes
retro_amel_586, retro_amel_644, retro_amel_825,
Bos taurus ENSBTAG00000001637 possible_ortholog 4 retrogenes
retro_btau_1370, retro_btau_1591, retro_btau_305, retro_btau_587,
Canis familiaris ENSCAFG00000014506 possible_ortholog 3 retrogenes
retro_cfam_1269, retro_cfam_1675, retro_cfam_951,
Callithrix jacchus ENSCJAG00000010876 ortholog_one2many 1 retrogene
retro_cjac_896,
Cavia porcellus ENSCPOG00000012962 ortholog_one2many 2 retrogenes
retro_cpor_507, retro_cpor_508,
Dasypus novemcinctus ENSDNOG00000014551 possible_ortholog 2 retrogenes
retro_dnov_2091, retro_dnov_2240,
Equus caballus ENSECAG00000022709 possible_ortholog 3 retrogenes
retro_ecab_210, retro_ecab_231, retro_ecab_567,
Echinops telfairi ENSETEG00000012763 ortholog_one2many 3 retrogenes
retro_etel_1614, retro_etel_697, retro_etel_852,
Felis catus ENSFCAG00000005541 possible_ortholog 3 retrogenes
retro_fcat_1493, retro_fcat_179, retro_fcat_205,
Homo sapiens ENSG00000069509 ortholog_one2many 1 retrogene
retro_hsap_936,
Gorilla gorilla ENSGGOG00000023311 ortholog_one2many 1 retrogene
retro_ggor_755,
Latimeria chalumnae ENSLACG00000010215 ortholog_one2many 1 retrogene
retro_lcha_74,
Macropus eugenii ENSMEUG00000006795 ortholog_one2many 5 retrogenes
retro_meug_1597, retro_meug_2127, retro_meug_232, retro_meug_415, retro_meug_994,
Microcebus murinus ENSMICG00000000450 ortholog_one2many 2 retrogenes
retro_mmur_1189, retro_mmur_1461,
Myotis lucifugus ENSMLUG00000015860 possible_ortholog 3 retrogenes
retro_mluc_1032, retro_mluc_2302, retro_mluc_2304,
Macaca mulatta ENSMMUG00000010248 within_species_paralog 1 retrogene
retro_mmul_78,
Monodelphis domestica ENSMODG00000021088 ortholog_one2many 3 retrogenes
retro_mdom_1262, retro_mdom_769, retro_mdom_917,
Mustela putorius furo ENSMPUG00000012924 possible_ortholog 1 retrogene
retro_mputfur_209,
Nomascus leucogenys ENSNLEG00000002513 ortholog_one2many 2 retrogenes
retro_nleu_2760, retro_nleu_294,
Oryctolagus cuniculus ENSOCUG00000029753 ortholog_many2many 5 retrogenes
retro_ocun_1008, retro_ocun_1376, retro_ocun_1567, retro_ocun_27, retro_ocun_314,
Pongo abelii ENSPPYG00000020268 ortholog_one2many 2 retrogenes
retro_pabe_806, retro_pabe_829,
Pelodiscus sinensis ENSPSIG00000013793 ortholog_one2many 1 retrogene
retro_psin_30,
Pan troglodytes ENSPTRG00000021821 ortholog_one2many 1 retrogene
retro_ptro_648,
Pteropus vampyrus ENSPVAG00000009327 possible_ortholog 2 retrogenes
retro_pvam_1380, retro_pvam_232,
Rattus norvegicus ENSRNOG00000003470 ortholog_one2many 1 retrogene
retro_rnor_2644,
Sorex araneus ENSSARG00000012878 possible_ortholog 4 retrogenes
retro_sara_276, retro_sara_367, retro_sara_494, retro_sara_551,
Sarcophilus harrisii ENSSHAG00000000501 ortholog_one2many 1 retrogene
retro_shar_222,
Tarsius syrichta ENSTSYG00000009139 ortholog_one2many 1 retrogene
retro_tsyr_1522,
Tursiops truncatus ENSTTRG00000010466 possible_ortholog 2 retrogenes
retro_ttru_1099, retro_ttru_1735,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_38 87.74 100.00
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Download FASTA sequences of all ENSMMUG00000003505 retrocopies