Parental gene: | FUNDC1, ENSBTAG00000001637 |
| Aliases: | None |
| Description: | FUN14 domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F1N5S9] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | X:104529013..104540078(+) |
>ENSBTAG00000001637
ATGGCGACCCGGAACCCCCCTCCCCAAGAATATGAAAGTGATGATGATTCTTACGAAGTGTTGGATTTAACTGAGTATGC
CAGAAGACATCACTGGTGGAATCGAGTGTTTGGCCACAGTTCCGGACCTATGGTAGAAAAATACTCGGTAGCCACCCAGA
TTGTAATGGGTGGAGTGAGTGGCTGGTGTGCGGGATTTTTGTTCCAGAAAGTTGGAAAACTTGCAGCAACTGCAGTAGGT
GGTGGCTTTCTTCTCCTTCAGATTGCCAGTCACAGTGGCTATGTGCAGATCGACTGGAAGAGAGTGGAAAAAGATGTAAA
CAAAGCAAAAAGACAGATTAAGAAACGAGCAAATAAGGCAGCACCTGAAATCAATAACATAATAGAAGAAGCAACAGAAT
TTGTCAAACAGAACATTGTGATATCCAGTGGATTTGTGGGAGGCTTTTTGCTAGGCCTTGCATCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 9 .44 RPM |
| ERP005899_muscle | 11 .24 RPM |
| SRP017611_brain | 10 .69 RPM |
| SRP017611_kidney | 10 .25 RPM |
| SRP017611_liver | 4 .68 RPM |
| SRP030211_testis | 9 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010258 | ortholog_one2one | 3 retrogenes | |
| Bos taurus | ENSBTAG00000016977 | within_species_paralog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000014506 | ortholog_one2one | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000014551 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000022709 | ortholog_one2one | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000012763 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000005541 | ortholog_one2one | 3 retrogenes | |
| Latimeria chalumnae | ENSLACG00000010215 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000006795 | ortholog_one2one | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000015860 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000003505 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000021088 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000012924 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000029753 | possible_ortholog | 5 retrogenes | |
| Pelodiscus sinensis | ENSPSIG00000013793 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000009327 | ortholog_one2one | 2 retrogenes | |
| Sorex araneus | ENSSARG00000012878 | ortholog_one2one | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000000501 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000010466 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_305 | 96.79 | 100.00 | Please wait, loading  |
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| 2. | retro_btau_587 | 92.95 | 100.00 | Please wait, loading |
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| 3. | retro_btau_1370 | 78.18 | 70.97 | Please wait, loading |
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| 4. | retro_btau_1591 | 82.58 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSBTAG00000001637 retrocopies