Common name: Chinese softshell turtle
Latin name: Pelodiscus sinensis
Genome assembly: PelSin_1.0
All retrocopies: 64
Parental genes: 56

Summary: Number of retrocopies :
Conserved ORF: 39 ORF 25 ORF

# RetrogeneDB ID Identity Coverage ORF conservation
1. retro_psin_1 59.56 % 99.45 % ORF
2. retro_psin_2 74.38 % 98.78 % ORF
3. retro_psin_3 85.79 % 99.46 % ORF
4. retro_psin_4 62.53 % 98.93 % ORF
5. retro_psin_5 87.58 % 96.75 % ORF
6. retro_psin_6 51.03 % 60.59 % ORF
7. retro_psin_7 54.40 % 94.55 % ORF
8. retro_psin_8 66.43 % 99.29 % ORF
9. retro_psin_9 87.84 % 100.00 % ORF
10. retro_psin_10 80.61 % 100.00 % ORF
11. retro_psin_11 53.70 % 65.97 % ORF
12. retro_psin_12 70.24 % 87.50 % ORF
13. retro_psin_13 73.99 % 69.80 % ORF
14. retro_psin_14 59.58 % 89.53 % ORF
15. retro_psin_15 57.39 % 74.63 % ORF
16. retro_psin_16 58.59 % 60.37 % ORF
17. retro_psin_17 60.10 % 89.49 % ORF
18. retro_psin_18 50.85 % 51.08 % ORF
19. retro_psin_19 56.28 % 54.49 % ORF
20. retro_psin_20 53.80 % 61.53 % ORF
21. retro_psin_21 58.33 % 75.00 % ORF
22. retro_psin_22 61.30 % 95.38 % ORF
23. retro_psin_23 66.67 % 97.48 % ORF
24. retro_psin_24 54.33 % 69.15 % ORF
25. retro_psin_25 99.20 % 99.73 % ORF
26. retro_psin_26 60.85 % 72.14 % ORF
27. retro_psin_27 55.56 % 55.10 % ORF
28. retro_psin_28 91.47 % 61.58 % ORF
29. retro_psin_29 77.64 % 87.14 % ORF
30. retro_psin_30 56.04 % 90.00 % ORF
31. retro_psin_31 77.78 % 94.19 % ORF
32. retro_psin_32 77.22 % 78.22 % ORF
33. retro_psin_33 75.00 % 86.75 % ORF
34. retro_psin_34 78.57 % 87.37 % ORF
35. retro_psin_35 85.81 % 70.67 % ORF
36. retro_psin_36 70.09 % 66.86 % ORF
37. retro_psin_38 92.27 % 78.57 % ORF
38. retro_psin_39 78.17 % 100.00 % ORF
39. retro_psin_40 60.19 % 97.17 % ORF
40. retro_psin_41 89.13 % 50.36 % ORF
41. retro_psin_42 58.54 % 63.08 % ORF
42. retro_psin_43 86.24 % 82.47 % ORF
43. retro_psin_44 80.82 % 50.11 % ORF
44. retro_psin_45 70.89 % 89.35 % ORF
45. retro_psin_46 50.27 % 57.37 % ORF
46. retro_psin_47 76.15 % 91.85 % ORF
47. retro_psin_48 78.24 % 91.70 % ORF
48. retro_psin_49 57.43 % 55.02 % ORF
49. retro_psin_50 54.44 % 75.00 % ORF
50. retro_psin_51 72.97 % 50.57 % ORF
51. retro_psin_52 95.40 % 65.91 % ORF
52. retro_psin_53 64.07 % 51.24 % ORF
53. retro_psin_54 78.67 % 87.21 % ORF
54. retro_psin_55 96.00 % 92.59 % ORF
55. retro_psin_56 70.95 % 78.57 % ORF
56. retro_psin_57 80.12 % 66.12 % ORF
57. retro_psin_58 76.17 % 53.41 % ORF
58. retro_psin_59 77.30 % 97.46 % ORF
59. retro_psin_60 79.03 % 52.99 % ORF
60. retro_psin_61 58.45 % 53.95 % ORF
61. retro_psin_62 56.76 % 84.38 % ORF
62. retro_psin_63 51.36 % 72.56 % ORF
63. retro_psin_65 72.26 % 99.64 % ORF
64. retro_psin_66 74.38 % 73.95 % ORF
# Ensembl ID Symbol Description
1. ENSPSIG00000003379
2. ENSPSIG00000016462 SNRPF small nuclear ribonucleoprotein polypeptide F [Source:HGNC Symbol;Acc:11162]
3. ENSPSIG00000004827
4. ENSPSIG00000012450 HSC70 Heat shock cognate protein 70 [Source:UniProtKB/TrEMBL;Acc:E2JFA5]
5. ENSPSIG00000002102 ACTG1 actin, gamma 1 [Source:HGNC Symbol;Acc:144]
6. ENSPSIG00000017721 DNAJC8 DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:HGNC Symbol;Acc:15470]
7. ENSPSIG00000015400
8. ENSPSIG00000009402 STX6 syntaxin 6 [Source:HGNC Symbol;Acc:11441]
9. ENSPSIG00000006688
10. ENSPSIG00000008375 SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:10901]
11. ENSPSIG00000003919 RAB14 RAB14, member RAS oncogene family [Source:HGNC Symbol;Acc:16524]
12. ENSPSIG00000004688
13. ENSPSIG00000015739
14. ENSPSIG00000010721
15. ENSPSIG00000003011 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:24941]
16. ENSPSIG00000003295 RPL34 ribosomal protein L34 [Source:HGNC Symbol;Acc:10340]
17. ENSPSIG00000017155 SPPL2C signal peptide peptidase like 2C [Source:HGNC Symbol;Acc:28902]
18. ENSPSIG00000003457 RPS12 ribosomal protein S12 [Source:HGNC Symbol;Acc:10385]
19. ENSPSIG00000002330 MEA1 male-enhanced antigen 1 [Source:HGNC Symbol;Acc:6986]
20. ENSPSIG00000017641 RAP2A RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:9861]
21. ENSPSIG00000010727
22. ENSPSIG00000015680 EPCAM epithelial cell adhesion molecule [Source:HGNC Symbol;Acc:11529]
23. ENSPSIG00000011044
24. ENSPSIG00000007114
25. ENSPSIG00000004826 HTRA2 HtrA serine peptidase 2 [Source:HGNC Symbol;Acc:14348]
26. ENSPSIG00000008115
27. ENSPSIG00000006088 C9orf171 chromosome 9 open reading frame 171 [Source:HGNC Symbol;Acc:33776]
28. ENSPSIG00000007174 TMEM30A transmembrane protein 30A [Source:HGNC Symbol;Acc:16667]
29. ENSPSIG00000005922 RPS14 ribosomal protein S14 [Source:HGNC Symbol;Acc:10387]
30. ENSPSIG00000006205
31. ENSPSIG00000009767 ARF1 ADP-ribosylation factor 1 [Source:HGNC Symbol;Acc:652]
32. ENSPSIG00000016757
33. ENSPSIG00000014195 RHOV ras homolog family member V [Source:HGNC Symbol;Acc:18313]
34. ENSPSIG00000013998
35. ENSPSIG00000012692 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide [Source:HGNC Symbol;Acc:12854]
36. ENSPSIG00000016930 RPS16 ribosomal protein S16 [Source:HGNC Symbol;Acc:10396]
37. ENSPSIG00000003703 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855]
38. ENSPSIG00000012793 CAPNS1 calpain, small subunit 1 [Source:HGNC Symbol;Acc:1481]
39. ENSPSIG00000011089 RPS11 ribosomal protein S11 [Source:HGNC Symbol;Acc:10384]
40. ENSPSIG00000015992
41. ENSPSIG00000004124 PFN1 profilin 1 [Source:HGNC Symbol;Acc:8881]
42. ENSPSIG00000017246 GALNT12 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12) [Source:HGNC Symbol;Acc:19877]
43. ENSPSIG00000004692
44. ENSPSIG00000008882 MRPS25 mitochondrial ribosomal protein S25 [Source:HGNC Symbol;Acc:14511]
45. ENSPSIG00000013173
46. ENSPSIG00000006864 TRNAU1AP tRNA selenocysteine 1 associated protein 1 [Source:HGNC Symbol;Acc:30813]
47. ENSPSIG00000015261
48. ENSPSIG00000004134 HDAC1 histone deacetylase 1 [Source:HGNC Symbol;Acc:4852]
49. ENSPSIG00000013793 FUNDC1 FUN14 domain containing 1 [Source:HGNC Symbol;Acc:28746]
50. ENSPSIG00000004553 ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) [Source:HGNC Symbol;Acc:11343]
51. ENSPSIG00000005627 SOCS7 suppressor of cytokine signaling 7 [Source:HGNC Symbol;Acc:29846]
52. ENSPSIG00000005441 ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 [Source:HGNC Symbol;Acc:814]
53. ENSPSIG00000005931 H2AFV H2A histone family, member V [Source:HGNC Symbol;Acc:20664]
54. ENSPSIG00000015328 RHOA ras homolog family member A [Source:HGNC Symbol;Acc:667]
55. ENSPSIG00000018102
56. ENSPSIG00000008625 DDX49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:HGNC Symbol;Acc:18684]
Retrogenes FASTA BED
TSV (download all or selected columns from MySQL table)
Parental genes FASTA BED
TSV (download all or selected columns from MySQL table)