Parental gene:

FUNDC1, ENSETEG00000012763

Aliases:None
Description:FUN14 domain containing 1 [Source:HGNC Symbol;Acc:28746]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_602:5026..16857(-)


>ENSETEG00000012763
TATGAAAGTGATGACGAGTCTTATGAAGTGTTGGATTTAACTGAGTATGCCAGAAGACACCACTGGTGGAATCGAGTGTT
TGGCCACAGTTCAGGACCCATGGTAGAAAAATACTCAGTAGCCACTCAGATCGTGATGGGTGGAGTGACTGGCTGGTGTG
CTGGATTTTTGTTCCAGAAAGTTGGAAAGCTTGCGGCAACTGCGGTAGGCGGTGGCTTTCTTCTCCTTCAGATTGCCAGT
CACAGTGGCTATGTCCAGGTTGATTGGAAGAGAGTTGAAAAAGATGTGAACAAAGCAAAAAGACAGATAAAGAAACGTGC
AAATAAAGCAGCACCTGAAATCAACAATATCATTGAAGAAGCTACAGAATTTATTAAACAGAACATCGTGATATCCAGTG
GATTTGTGGGAGGCTTTTTGCTAGGACTTGCATCATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010258 ortholog_one2one 3 retrogenes
retro_amel_586, retro_amel_644, retro_amel_825,
Bos taurus ENSBTAG00000001637 ortholog_one2one 4 retrogenes
retro_btau_1370, retro_btau_1591, retro_btau_305, retro_btau_587,
Canis familiaris ENSCAFG00000014506 ortholog_one2one 3 retrogenes
retro_cfam_1269, retro_cfam_1675, retro_cfam_951,
Callithrix jacchus ENSCJAG00000010876 ortholog_one2one 1 retrogene
retro_cjac_896,
Cavia porcellus ENSCPOG00000012962 ortholog_one2one 2 retrogenes
retro_cpor_507, retro_cpor_508,
Dasypus novemcinctus ENSDNOG00000014551 ortholog_one2one 2 retrogenes
retro_dnov_2091, retro_dnov_2240,
Equus caballus ENSECAG00000022709 ortholog_one2one 3 retrogenes
retro_ecab_210, retro_ecab_231, retro_ecab_567,
Echinops telfairi ENSETEG00000013817 within_species_paralog 2 retrogenes
retro_etel_1724, retro_etel_435,
Felis catus ENSFCAG00000005541 ortholog_one2one 3 retrogenes
retro_fcat_1493, retro_fcat_179, retro_fcat_205,
Homo sapiens ENSG00000069509 ortholog_one2one 1 retrogene
retro_hsap_936,
Gorilla gorilla ENSGGOG00000023311 ortholog_one2one 1 retrogene
retro_ggor_755,
Latimeria chalumnae ENSLACG00000010215 ortholog_one2one 1 retrogene
retro_lcha_74,
Macropus eugenii ENSMEUG00000006795 ortholog_one2one 5 retrogenes
retro_meug_1597, retro_meug_2127, retro_meug_232, retro_meug_415, retro_meug_994,
Microcebus murinus ENSMICG00000000450 ortholog_one2one 2 retrogenes
retro_mmur_1189, retro_mmur_1461,
Myotis lucifugus ENSMLUG00000015860 ortholog_one2one 3 retrogenes
retro_mluc_1032, retro_mluc_2302, retro_mluc_2304,
Macaca mulatta ENSMMUG00000003505 ortholog_one2many 1 retrogene
retro_mmul_38,
Monodelphis domestica ENSMODG00000021088 ortholog_one2one 3 retrogenes
retro_mdom_1262, retro_mdom_769, retro_mdom_917,
Mustela putorius furo ENSMPUG00000012924 ortholog_one2one 1 retrogene
retro_mputfur_209,
Nomascus leucogenys ENSNLEG00000002513 ortholog_one2one 2 retrogenes
retro_nleu_2760, retro_nleu_294,
Oryctolagus cuniculus ENSOCUG00000029753 ortholog_one2many 5 retrogenes
retro_ocun_1008, retro_ocun_1376, retro_ocun_1567, retro_ocun_27, retro_ocun_314,
Pongo abelii ENSPPYG00000020268 ortholog_one2one 2 retrogenes
retro_pabe_806, retro_pabe_829,
Pelodiscus sinensis ENSPSIG00000013793 ortholog_one2one 1 retrogene
retro_psin_30,
Pan troglodytes ENSPTRG00000021821 ortholog_one2one 1 retrogene
retro_ptro_648,
Pteropus vampyrus ENSPVAG00000009327 ortholog_one2one 2 retrogenes
retro_pvam_1380, retro_pvam_232,
Rattus norvegicus ENSRNOG00000003470 ortholog_one2one 1 retrogene
retro_rnor_2644,
Sorex araneus ENSSARG00000012878 ortholog_one2one 4 retrogenes
retro_sara_276, retro_sara_367, retro_sara_494, retro_sara_551,
Sarcophilus harrisii ENSSHAG00000000501 ortholog_one2one 1 retrogene
retro_shar_222,
Tarsius syrichta ENSTSYG00000009139 ortholog_one2one 1 retrogene
retro_tsyr_1522,
Tursiops truncatus ENSTTRG00000010466 ortholog_one2one 2 retrogenes
retro_ttru_1099, retro_ttru_1735,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_697 81.72 63.45
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_etel_852 77.31 80.69
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_etel_1614 88.17 64.14
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSETEG00000012763 retrocopies