Parental gene:

Fundc1, ENSRNOG00000003470

Aliases:None
Description:FUN14 domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q5BJS4]
Organism:Rat (Rattus norvegicus)
Coordinates:X:6329907..6346563(+)


>ENSRNOG00000003470
ATGGCGTCCCGGAACCCCCCTCCCCAAGACTATGAGAGCGATGACGAGTCTTACGAAGTGTTGGATTTAACTGAGTATGC
AAGAAGACACCACTGGTGGAATCGTGTATTTGGCCACAGTTCCGGACCTATGGTAGAAAAATACTCAGTAGCTACCCAGA
TAGTAATGGGTGGCGTGACTGGCTGGTGTGCAGGATTTTTATTCCAAAAGGTTGGAAAACTTGCTGCAACTGCAGTAGGT
GGTGGTTTTCTTCTTCTACAGGTTGCCAGTCACAGTGGCTATGTGCAGATCGACTGGAAGAGAGTTGAAAAAGATGTAAA
CAAAGCAAAAAGACAGATTAAGAAGCGAGCAAATAAGGCAGCACCTGAAATCAACAATATAATTGAAGAAGCAACAGACT
TTATCAAGCAGAACATTGTGATATCCAGCGGCTTCGTGGGAGGCTTTTTGCTAGGCCTGGCATCTTAA

Library Parental gene expression (RPM)
SRP017611_brain 19 .27 RPM
SRP017611_kidney 16 .89 RPM
SRP017611_liver 6 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010876 ortholog_one2one 1 retrogene
retro_cjac_896,
Cavia porcellus ENSCPOG00000012962 ortholog_one2one 2 retrogenes
retro_cpor_507, retro_cpor_508,
Echinops telfairi ENSETEG00000012763 ortholog_one2one 3 retrogenes
retro_etel_1614, retro_etel_697, retro_etel_852,
Homo sapiens ENSG00000069509 ortholog_one2one 1 retrogene
retro_hsap_936,
Gorilla gorilla ENSGGOG00000023311 ortholog_one2one 1 retrogene
retro_ggor_755,
Latimeria chalumnae ENSLACG00000010215 ortholog_one2one 1 retrogene
retro_lcha_74,
Macropus eugenii ENSMEUG00000006795 ortholog_one2one 5 retrogenes
retro_meug_1597, retro_meug_2127, retro_meug_232, retro_meug_415, retro_meug_994,
Microcebus murinus ENSMICG00000000450 ortholog_one2one 2 retrogenes
retro_mmur_1189, retro_mmur_1461,
Macaca mulatta ENSMMUG00000003505 ortholog_one2many 1 retrogene
retro_mmul_38,
Monodelphis domestica ENSMODG00000021088 ortholog_one2one 3 retrogenes
retro_mdom_1262, retro_mdom_769, retro_mdom_917,
Nomascus leucogenys ENSNLEG00000002513 ortholog_one2one 2 retrogenes
retro_nleu_2760, retro_nleu_294,
Oryctolagus cuniculus ENSOCUG00000029753 ortholog_one2many 5 retrogenes
retro_ocun_1008, retro_ocun_1376, retro_ocun_1567, retro_ocun_27, retro_ocun_314,
Pongo abelii ENSPPYG00000020268 ortholog_one2one 2 retrogenes
retro_pabe_806, retro_pabe_829,
Pelodiscus sinensis ENSPSIG00000013793 ortholog_one2one 1 retrogene
retro_psin_30,
Pan troglodytes ENSPTRG00000021821 ortholog_one2one 1 retrogene
retro_ptro_648,
Rattus norvegicus ENSRNOG00000024066 within_species_paralog 2 retrogenes
retro_rnor_1648, retro_rnor_2870,
Sarcophilus harrisii ENSSHAG00000000501 ortholog_one2one 1 retrogene
retro_shar_222,
Tarsius syrichta ENSTSYG00000009139 ortholog_one2one 1 retrogene
retro_tsyr_1522,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2644 60.42 89.03
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000003470 retrocopies