Parental gene:

FABP5, ENSPTRG00000020373

Aliases:FABP5, FABP5L2, FABP5L7
Description:fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:8:79343789..79348052(+)


>ENSPTRG00000020373
ATGGCCACAGTTCAGCAGCTGGAAGGAAGATGGCGCCTGGTGGACAGCAAAGGCTTTGATGAATACATGAAGGAGCTAGG
AGTGGGAATAGCTTTGCGAAAAATGGGCGCAATGGCCAAGCCAGATTGTATCATCACTTGTGATGGTAAAAACCTCACCA
TAAAAACTGAAAGCACTTTGAAAACAACACAGTTTTCTTGTACCCTGGGAGAGAAGTTTGAAGAAACCACAGCTGATGGC
AGAAAAACTCAGACTGTCTGCAACTTTACAGATGGTGCATTGGTTCAGCATCAGGAGTGGGATGGGAAGGAAAGCACAAT
AACAAGAAAATTGAAAGATGGGAAATTAGTGGTGGAGTGTGTCATGAACAATGTCACCTGTACTCGGATCTATGAAAAAG
TAGAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .25 RPM
SRP007412_cerebellum 8 .64 RPM
SRP007412_heart 19 .18 RPM
SRP007412_kidney 0 .76 RPM
SRP007412_liver 1 .18 RPM
SRP007412_testis 20 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014619 ortholog_one2many 1 retrogene
retro_amel_1139,
Bos taurus ENSBTAG00000047330 ortholog_one2one 3 retrogenes
retro_btau_1312, retro_btau_1828, retro_btau_886,
Callithrix jacchus ENSCJAG00000000444 ortholog_one2one 4 retrogenes
retro_cjac_1832, retro_cjac_2227, retro_cjac_2816, retro_cjac_4084,
Cavia porcellus ENSCPOG00000025732 ortholog_one2one 1 retrogene
retro_cpor_948,
Dasypus novemcinctus ENSDNOG00000018066 ortholog_one2one 5 retrogenes
retro_dnov_1073, retro_dnov_1231, retro_dnov_1318, retro_dnov_2392, retro_dnov_559,
Equus caballus ENSECAG00000008270 ortholog_one2one 2 retrogenes
retro_ecab_894, retro_ecab_938,
Erinaceus europaeus ENSEEUG00000014023 ortholog_one2one 2 retrogenes
retro_eeur_405, retro_eeur_627,
Echinops telfairi ENSETEG00000007443 ortholog_one2one 14 retrogenes
retro_etel_1024, retro_etel_1241, retro_etel_1276, retro_etel_1405, retro_etel_1467, retro_etel_1706, retro_etel_1842, retro_etel_1904, retro_etel_2003, retro_etel_512, retro_etel_602, retro_etel_620, retro_etel_806, retro_etel_994,
Felis catus ENSFCAG00000006032 ortholog_one2one 2 retrogenes
retro_fcat_1243, retro_fcat_1834,
Homo sapiens ENSG00000164687 ortholog_one2one 12 retrogenes
retro_hsap_1205, retro_hsap_1279, retro_hsap_1520, retro_hsap_1521, retro_hsap_2167, retro_hsap_2568, retro_hsap_3000, retro_hsap_3357, retro_hsap_3376, retro_hsap_3811, retro_hsap_4717, retro_hsap_880,
Latimeria chalumnae ENSLACG00000008511 ortholog_many2many 3 retrogenes
retro_lcha_37, retro_lcha_45, retro_lcha_57,
Macropus eugenii ENSMEUG00000002136 ortholog_one2one 1 retrogene
retro_meug_1874,
Microcebus murinus ENSMICG00000001311 ortholog_one2one 2 retrogenes
retro_mmur_137, retro_mmur_702,
Myotis lucifugus ENSMLUG00000009514 ortholog_one2one 3 retrogenes
retro_mluc_1590, retro_mluc_1920, retro_mluc_501,
Macaca mulatta ENSMMUG00000000486 ortholog_one2many 4 retrogenes
retro_mmul_1417, retro_mmul_1920, retro_mmul_2095, retro_mmul_2230,
Mus musculus ENSMUSG00000027533 ortholog_one2one 4 retrogenes
retro_mmus_1685, retro_mmus_1791, retro_mmus_2084, retro_mmus_3185,
Otolemur garnettii ENSOGAG00000002413 ortholog_one2one 10 retrogenes
retro_ogar_1024, retro_ogar_1151, retro_ogar_1286, retro_ogar_1676, retro_ogar_2873, retro_ogar_3066, retro_ogar_3099, retro_ogar_3265, retro_ogar_715, retro_ogar_878,
Oryzias latipes ENSORLG00000008282 ortholog_many2many 1 retrogene
retro_olat_7,
Pongo abelii ENSPPYG00000018699 ortholog_one2one 1 retrogene
retro_pabe_27,
Pan troglodytes ENSPTRG00000000457 within_species_paralog 1 retrogene
retro_ptro_3047,
Pan troglodytes ENSPTRG00000018564 within_species_paralog 1 retrogene
retro_ptro_402,
Pan troglodytes ENSPTRG00000022654 within_species_paralog 1 retrogene
retro_ptro_2493,
Pteropus vampyrus ENSPVAG00000017850 ortholog_one2one 5 retrogenes
retro_pvam_1159, retro_pvam_467, retro_pvam_531, retro_pvam_852, retro_pvam_89,
Rattus norvegicus ENSRNOG00000049075 ortholog_one2one 3 retrogenes
retro_rnor_1762, retro_rnor_1879, retro_rnor_1997,
Sus scrofa ENSSSCG00000006153 ortholog_one2one 1 retrogene
retro_sscr_476,
Ictidomys tridecemlineatus ENSSTOG00000007877 ortholog_one2many 3 retrogenes
retro_itri_1305, retro_itri_389, retro_itri_72,
Tarsius syrichta ENSTSYG00000001472 ortholog_one2one 5 retrogenes
retro_tsyr_126, retro_tsyr_1534, retro_tsyr_1894, retro_tsyr_1982, retro_tsyr_2024,
Tursiops truncatus ENSTTRG00000005377 ortholog_one2one 1 retrogene
retro_ttru_1800,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_823 94.07 100.00
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2. retro_ptro_875 93.33 100.00
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3. retro_ptro_1029 91.18 100.00
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4. retro_ptro_1030 89.63 100.00
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5. retro_ptro_1498 94.07 100.00
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6. retro_ptro_1654 90.09 82.22
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7. retro_ptro_2029 79.53 94.07
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8. retro_ptro_2131 74.39 60.74
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9. retro_ptro_2265 99.26 100.00
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10. retro_ptro_2295 65.25 85.93
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11. retro_ptro_2664 92.59 100.00
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12. retro_ptro_3135 66.20 52.59
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Download FASTA sequences of all ENSPTRG00000020373 retrocopies