Parental gene:

FABP5, ENSG00000164687

Aliases:FABP5, E-FABP, EFABP, KFABP, PA-FABP, PAFABP
Description:fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560]
Organism:Human (Homo sapiens)
Coordinates:8:82192597..82197012(+)


>ENSG00000164687
ATGGCCACAGTTCAGCAGCTGGAAGGAAGATGGCGCCTGGTGGACAGCAAAGGCTTTGATGAATACATGAAGGAGCTAGG
AGTGGGAATAGCTTTGCGAAAAATGGGCGCAATGGCCAAGCCAGATTGTATCATCACTTGTGATGGTAAAAACCTCACCA
TAAAAACTGAGAGCACTTTGAAAACAACACAGTTTTCTTGTACCCTGGGAGAGAAGTTTGAAGAAACCACAGCTGATGGC
AGAAAAACTCAGACTGTCTGCAACTTTACAGATGGTGCATTGGTTCAGCATCAGGAGTGGGATGGGAAGGAAAGCACAAT
AACAAGAAAATTGAAAGATGGGAAATTAGTGGTGGAGTGTGTCATGAACAATGTCACCTGTACTCGGATCTATGAAAAAG
TAGAATAA

Library Parental gene expression (RPM)
bodymap2_adipose 19 .10 RPM
bodymap2_adrenal 30 .15 RPM
bodymap2_brain 20 .77 RPM
bodymap2_breast 44 .65 RPM
bodymap2_colon 21 .44 RPM
bodymap2_heart 14 .62 RPM
bodymap2_kidney 2 .48 RPM
bodymap2_liver 0 .42 RPM
bodymap2_lung 14 .24 RPM
bodymap2_lymph_node 31 .58 RPM
bodymap2_ovary 4 .59 RPM
bodymap2_prostate 21 .62 RPM
bodymap2_skeletal_muscle 3 .60 RPM
bodymap2_testis 11 .88 RPM
bodymap2_thyroid 7 .38 RPM
bodymap2_white_blood_cells 1 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014619 ortholog_one2many 1 retrogene
retro_amel_1139,
Bos taurus ENSBTAG00000047330 ortholog_one2one 3 retrogenes
retro_btau_1312, retro_btau_1828, retro_btau_886,
Callithrix jacchus ENSCJAG00000000444 ortholog_one2one 4 retrogenes
retro_cjac_1832, retro_cjac_2227, retro_cjac_2816, retro_cjac_4084,
Cavia porcellus ENSCPOG00000025732 ortholog_one2one 1 retrogene
retro_cpor_948,
Dasypus novemcinctus ENSDNOG00000018066 ortholog_one2one 5 retrogenes
retro_dnov_1073, retro_dnov_1231, retro_dnov_1318, retro_dnov_2392, retro_dnov_559,
Equus caballus ENSECAG00000008270 ortholog_one2one 2 retrogenes
retro_ecab_894, retro_ecab_938,
Erinaceus europaeus ENSEEUG00000014023 ortholog_one2one 2 retrogenes
retro_eeur_405, retro_eeur_627,
Echinops telfairi ENSETEG00000007443 ortholog_one2one 14 retrogenes
retro_etel_1024, retro_etel_1241, retro_etel_1276, retro_etel_1405, retro_etel_1467, retro_etel_1706, retro_etel_1842, retro_etel_1904, retro_etel_2003, retro_etel_512, retro_etel_602, retro_etel_620, retro_etel_806, retro_etel_994,
Felis catus ENSFCAG00000006032 ortholog_one2one 2 retrogenes
retro_fcat_1243, retro_fcat_1834,
Homo sapiens ENSG00000121769 within_species_paralog 1 retrogene
retro_hsap_1258,
Homo sapiens ENSG00000164434 within_species_paralog 1 retrogene
retro_hsap_536,
Homo sapiens ENSG00000197416 within_species_paralog 1 retrogene
retro_hsap_3679,
Latimeria chalumnae ENSLACG00000008511 ortholog_many2many 3 retrogenes
retro_lcha_37, retro_lcha_45, retro_lcha_57,
Macropus eugenii ENSMEUG00000002136 ortholog_one2one 1 retrogene
retro_meug_1874,
Microcebus murinus ENSMICG00000001311 ortholog_one2one 2 retrogenes
retro_mmur_137, retro_mmur_702,
Myotis lucifugus ENSMLUG00000009514 ortholog_one2one 3 retrogenes
retro_mluc_1590, retro_mluc_1920, retro_mluc_501,
Macaca mulatta ENSMMUG00000000486 ortholog_one2many 4 retrogenes
retro_mmul_1417, retro_mmul_1920, retro_mmul_2095, retro_mmul_2230,
Mus musculus ENSMUSG00000027533 ortholog_one2one 4 retrogenes
retro_mmus_1685, retro_mmus_1791, retro_mmus_2084, retro_mmus_3185,
Otolemur garnettii ENSOGAG00000002413 ortholog_one2one 10 retrogenes
retro_ogar_1024, retro_ogar_1151, retro_ogar_1286, retro_ogar_1676, retro_ogar_2873, retro_ogar_3066, retro_ogar_3099, retro_ogar_3265, retro_ogar_715, retro_ogar_878,
Oryzias latipes ENSORLG00000008282 ortholog_many2many 1 retrogene
retro_olat_7,
Pongo abelii ENSPPYG00000018699 ortholog_one2one 1 retrogene
retro_pabe_27,
Pan troglodytes ENSPTRG00000020373 ortholog_one2one 12 retrogenes
retro_ptro_1029, retro_ptro_1030, retro_ptro_1498, retro_ptro_1654, retro_ptro_2029, retro_ptro_2131, retro_ptro_2265, retro_ptro_2295, retro_ptro_2664, retro_ptro_3135, retro_ptro_823, retro_ptro_875,
Pteropus vampyrus ENSPVAG00000017850 ortholog_one2one 5 retrogenes
retro_pvam_1159, retro_pvam_467, retro_pvam_531, retro_pvam_852, retro_pvam_89,
Rattus norvegicus ENSRNOG00000049075 ortholog_one2one 3 retrogenes
retro_rnor_1762, retro_rnor_1879, retro_rnor_1997,
Sus scrofa ENSSSCG00000006153 ortholog_one2one 1 retrogene
retro_sscr_476,
Ictidomys tridecemlineatus ENSSTOG00000007877 ortholog_one2many 3 retrogenes
retro_itri_1305, retro_itri_389, retro_itri_72,
Tarsius syrichta ENSTSYG00000001472 ortholog_one2one 5 retrogenes
retro_tsyr_126, retro_tsyr_1534, retro_tsyr_1894, retro_tsyr_1982, retro_tsyr_2024,
Tursiops truncatus ENSTTRG00000005377 ortholog_one2one 1 retrogene
retro_ttru_1800,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_880 100.00 100.00
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2. retro_hsap_1205 95.56 100.00
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3. retro_hsap_1279 97.04 100.00
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4. retro_hsap_1520 91.18 100.00
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5. retro_hsap_1521 93.33 100.00
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6. retro_hsap_2167 91.96 82.96
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7. retro_hsap_2568 91.18 100.00
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8. retro_hsap_3000 78.91 94.81
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9. retro_hsap_3357 76.83 60.74
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10. retro_hsap_3376 61.86 85.93
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11. retro_hsap_3811 91.85 100.00
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12. retro_hsap_4717 66.20 52.59
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Download FASTA sequences of all ENSG00000164687 retrocopies