Parental gene:

FABP7, ENSPTRG00000018564

Aliases:None
Description:fatty acid binding protein 7, brain [Source:HGNC Symbol;Acc:3562]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:6:123988205..123992764(+)


>ENSPTRG00000018564
ATGGTGGAGGCTTTCTGTGCTACCTGGAAGCTGACCGACAGTCAGAACTTTGATGAGTACATGAAGGCTCTAGGCGTGGG
CTTTGCCACTAGGCAGGTGGGAAATGTGACCAAACCAACGGTAATTATCAGTCAAGAAGGAGACAAAGTGGTCATCAGGA
CTCTCAGCACATTCAAGAACACGGAGATTAGTTTCCAGCTGGGAGAAGAGTTTGATGAAACCACTGCAGATGATAGAAAC
TGTAAGTCTGTTGTTAGCCTGGATGGAGACAAACTTGTTCACATACAGAAATGGGATGGCAAAGAAACAAATTTTGTAAG
AGAAATTAAGGATGGCAAAATGGTTATGACCCTTACTTTTGGTGATGTGGTTGCTGTTCGCCACTATGAGAAGGCATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 19 .36 RPM
SRP007412_cerebellum 31 .69 RPM
SRP007412_heart 0 .06 RPM
SRP007412_kidney 0 .42 RPM
SRP007412_liver 0 .88 RPM
SRP007412_testis 0 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000014056 ortholog_one2many 1 retrogene
retro_cpor_34,
Homo sapiens ENSG00000164434 ortholog_one2one 1 retrogene
retro_hsap_536,
Gorilla gorilla ENSGGOG00000025475 ortholog_one2one 1 retrogene
retro_ggor_489,
Macaca mulatta ENSMMUG00000021907 ortholog_one2one 1 retrogene
retro_mmul_458,
Oryctolagus cuniculus ENSOCUG00000001497 ortholog_one2one 1 retrogene
retro_ocun_1874,
Otolemur garnettii ENSOGAG00000031110 ortholog_one2one 1 retrogene
retro_ogar_2821,
Ochotona princeps ENSOPRG00000000992 ortholog_one2one 1 retrogene
retro_opri_840,
Pongo abelii ENSPPYG00000016979 ortholog_one2one 1 retrogene
retro_pabe_213,
Pan troglodytes ENSPTRG00000000457 within_species_paralog 1 retrogene
retro_ptro_3047,
Pan troglodytes ENSPTRG00000020373 within_species_paralog 12 retrogenes
retro_ptro_1029, retro_ptro_1030, retro_ptro_1498, retro_ptro_1654, retro_ptro_2029, retro_ptro_2131, retro_ptro_2265, retro_ptro_2295, retro_ptro_2664, retro_ptro_3135, retro_ptro_823, retro_ptro_875,
Pan troglodytes ENSPTRG00000022654 within_species_paralog 1 retrogene
retro_ptro_2493,
Sarcophilus harrisii ENSSHAG00000003313 ortholog_one2one 1 retrogene
retro_shar_521,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_402 71.76 63.64
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Download FASTA sequences of all ENSPTRG00000018564 retrocopies