Parental gene: | OSTC, ENSGGOG00000026873 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 4:118046902..118063501(+) |
>ENSGGOG00000026873
ATGGAGACTTTGTACCGCGTCCCGTTCTTAGTGCTCGAATGTCCCAACCTGAAGCTGAAGAAGCCTCCCTGGTTGCACAT
GCCGTCGGCCATGACTGTGTATGCTCTGGTGGTGGTGTCTTACTTCCTCATCACCGGAGGAATAATTTATGATGTTATTG
TTGAACCTCCAAGTGTCGGTTCTATGACTGATGAACATGGACATCAGAGGCCAGTAGCTTTCTTGGCCTACAGAGTAAAT
GGACAATATATTATGGAAGGACTTGCATCCAGCTTCCTATTTACAATGGGAGGTTTAGGTTTCATAATCCTGGACCGATC
GAATGCACCAAATATCCCAAAACTCAATAGATTTCTTCTTCTGTTCATTGGATTCGTCTGTGTCCTATTGAGTTTTTTCA
TGGCTAGAGTATTCATGAGAATGAAACTGCCGGGCTATCTGATGGGTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .22 RPM |
| SRP007412_cerebellum | 5 .99 RPM |
| SRP007412_heart | 2 .47 RPM |
| SRP007412_kidney | 18 .36 RPM |
| SRP007412_liver | 38 .38 RPM |
| SRP007412_testis | 14 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001753 | possible_ortholog | 2 retrogenes | |
| Bos taurus | ENSBTAG00000011611 | possible_ortholog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000011286 | possible_ortholog | 12 retrogenes | |
| Callithrix jacchus | ENSCJAG00000016002 | ortholog_many2many | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000024467 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000011172 | possible_ortholog | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000003717 | possible_ortholog | 4 retrogenes | |
| Homo sapiens | ENSG00000198856 | possible_ortholog | 7 retrogenes | |
| Loxodonta africana | ENSLAFG00000026381 | possible_ortholog | 7 retrogenes | |
| Myotis lucifugus | ENSMLUG00000000478 | possible_ortholog | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000020599 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000008869 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000041084 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012929 | ortholog_one2one | 11 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000011056 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000033684 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000024222 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000005915 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000023322 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000009145 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000021644 | possible_ortholog | 6 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000724 | possible_ortholog | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000003446 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_215 | 91.95 | 100.00 | Please wait, loading  |
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| 2. | retro_ggor_370 | 88.67 | 100.00 | Please wait, loading |
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| 3. | retro_ggor_385 | 88.16 | 100.00 | Please wait, loading |
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| 4. | retro_ggor_1457 | 90.73 | 100.00 | Please wait, loading |
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| 5. | retro_ggor_2060 | 89.33 | 100.00 | Please wait, loading |
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| 6. | retro_ggor_2427 | 86.33 | 93.29 | Please wait, loading |
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Download FASTA sequences of all ENSGGOG00000026873 retrocopies