Parental gene:

SEPT2, ENSCJAG00000006122

Aliases:None
Description:septin 2 [Source:HGNC Symbol;Acc:7729]
Organism:Marmoset (Callithrix jacchus)
Coordinates:6:157851699..157892215(+)


>ENSCJAG00000006122
ACACAGCGAGTAGTAAGCGGGGAGGGAGCCACTAGGCCTTGCCTGCTTGTACCTTCGGCGTGGAGAGGCACGGACAGACA
GCAGGGAGACGAAACTTCACAAAAGATGTCTAAGCAACAACCAGCTCAGTTTATAAATCCAGAAACTCCTGGCTATGTTG
GATTTGCAAATCTCCCCAATCAAGTTCACCGAAAATCAGTGAAAAAAGGTTTTGAGTTCACACTGATGGTGGTTGGTGAA
TCAGGTCTAGGAAAATCGACTCTCATAAACAGCCTATTCCTAACTGATCTCTACCCAGAAAGAGTTATACCTGGCGCTGC
AGAGAAAATTGAAAGAACCGTCCAAATTGAGGCTTCAACTGTTGAAATCGAAGAGCGAGGGGTCAAGCTACGCCTGACAG
TGGTCGATACCCCCGGCTACGGTGACGCCATCAACTGCAGGGATTGTTTTAAGACGATCATCTCCTATATTGACGAGCAG
TTTGAGCGGTACCTGCATGACGAGAGCGGCTTGAACAGGCGACACATTGTGGATAACCGAGTGCACTGCTGCTTTTACTT
CATTTCCCCTTTTGGACACGGACTTAAGCCATTAGATGTGGCGTTTATGAAGGCAATACACAACAAGGTGAATATTGTGC
CTGTCATTGCAAAAGCTGACACCCTCACCCTGAAGGAACGGGAGCGGCTGAAGAAAAGGATTCTGGATGAAATTGAAGAA
CATAACATCAAAATCTATCACTTACCTGATGCAGAATCAGACGAAGATGAAGATTTTAAAGAGCAGACGAGACTTCTCAA
GGCTAGCATCCCATTCTCTGTGGTTGGATCCAATCAGTTGATTGAAGCCAAAGGAAAGAAGGTCAGAGGCCGCCTCTACC
CCTGGGGTGTTGTGGAGGTGGAGAACCCAGAGCACAACGACTTTCTGAAGCTGAGAACCATGCTCATCACCCACATGCAG
GATCTCCAGGAGGTGACCCAGGACCTTCATTATGAAAACTTCCGTTCTGAGAGACTCAAGAGAGGTGGCAGGAAAGTGGA
GAACGAGGACATGAATAAAGACCAGATCTTGCTGGAAAAGGAAGCTGAGCTCCGCCGCATGCAAGAGATGATCGCCAGGA
TGCAGGCGCAGATGCAGATGCAGATGCAGGGCGGGGACAGTGATGGCGGGGCTCTTGGGCACCATGTTTAA

Library Parental gene expression (RPM)
SRP051959_spleen 48 .68 RPM
SRP051959_skeletal_muscle 15 .18 RPM
SRP051959_lymph_node 38 .31 RPM
SRP051959_lung 46 .13 RPM
SRP051959_liver 17 .59 RPM
SRP051959_kidney 35 .85 RPM
SRP051959_heart 44 .96 RPM
SRP051959_colon 32 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002608 ortholog_one2one 1 retrogene
retro_btau_1185,
Canis familiaris ENSCAFG00000012960 ortholog_one2one 1 retrogene
retro_cfam_1477,
Choloepus hoffmanni ENSCHOG00000008715 ortholog_one2one 5 retrogenes
retro_chof_1371, retro_chof_1579, retro_chof_2198, retro_chof_275, retro_chof_614,
Callithrix jacchus ENSCJAG00000012276 within_species_paralog 2 retrogenes
retro_cjac_1259, retro_cjac_3809,
Callithrix jacchus ENSCJAG00000014744 other_paralog 1 retrogene
retro_cjac_2336,
Callithrix jacchus ENSCJAG00000017754 other_paralog 3 retrogenes
retro_cjac_1736, retro_cjac_2879, retro_cjac_828,
Cavia porcellus ENSCPOG00000013687 ortholog_one2one 1 retrogene
retro_cpor_845,
Loxodonta africana ENSLAFG00000011964 ortholog_one2many 1 retrogene
retro_lafr_4,
Macropus eugenii ENSMEUG00000016519 ortholog_one2many 1 retrogene
retro_meug_39,
Myotis lucifugus ENSMLUG00000007108 ortholog_one2one 1 retrogene
retro_mluc_1594,
Monodelphis domestica ENSMODG00000016041 ortholog_one2one 1 retrogene
retro_mdom_888,
Mustela putorius furo ENSMPUG00000000166 ortholog_one2one 1 retrogene
retro_mputfur_436,
Nomascus leucogenys ENSNLEG00000013873 ortholog_one2one 1 retrogene
retro_nleu_1848,
Otolemur garnettii ENSOGAG00000004457 ortholog_one2one 1 retrogene
retro_ogar_2239,
Pteropus vampyrus ENSPVAG00000000558 ortholog_one2one 1 retrogene
retro_pvam_448,
Rattus norvegicus ENSRNOG00000017952 ortholog_one2one 1 retrogene
retro_rnor_1110,
Ictidomys tridecemlineatus ENSSTOG00000013357 ortholog_one2one 1 retrogene
retro_itri_1227,
Drosophila melanogaster FBgn0011710 ortholog_one2one 1 retrogene
retro_dmel_35,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1501 92.55 64.14
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000006122 retrocopies