Parental gene:

Sept2, ENSRNOG00000017952

Aliases:Sept2, Nedd5, Vesp11
Description:Septin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q91Y81]
Organism:Rat (Rattus norvegicus)
Coordinates:9:100277908..100311079(+)


>ENSRNOG00000017952
ATGTCTAAGCAACAACCAACCCAGTTTATAAATCCAGAAACTCCTGGCTATGTTGGATTTGCAAATCTCCCCAATCAAGT
TCACCGAAAATCAGTGAAGAAGGGGTTCGAGTTCACTCTGATGGTGGTCGGTGAATCTGGTCTAGGAAAATCAACTCTCA
TAAACAGCTTATTCTTGACCGATCTCTACCCAGAAAGAATTATTCCTGGAGCTGCAGAAAAAATCGAAAGAACTGTCCAG
ATAGAGGCTTCGACAGTTGAAATCGAAGAGCGGGGTGTCAAGCTGCGGCTTACAGTAGTGGACACGCCTGGCTATGGGGA
TGCCATCAACTCCAGGGATTGTTTCAAGACAATTATCTCCTACATTGATGAGCAGTTTGAACGCTACCTACACGATGAGA
GTGGACTGAACAGGCGGCACATCATTGATAACAGGGTACATTGTTGCTTCTACTTCATTTCACCTTTTGGACATGGACTG
AAGCCCTTAGATGTTGCATTTATGAAAGCGATACACAATAAGGTGAATATTGTGCCTGTCATTGCGAAAGCTGACACTCT
CACTCTGAAGGAGCGGGAGCGGCTAAAGAAAAGGATTTTGGATGAAATTGAAGAGCACAGCATTAAAATCTATCATTTAC
CTGATGCAGAATCAGATGAAGATGAAGACTTTAAGGAACAGACTAGACTCCTCAAAGCCAGTATCCCATTCTCTGTGGTT
GGCTCCAACCAGTTGATTGAAGCCAAGGGCAAGAAGGTTAGAGGCCGTCTCTACCCGTGGGGCGTTGTCGAGGTGGAGAA
CCCAGAACATAATGACTTTCTGAAGCTGAGAACAATGCTCATCACCCACATGCAGGACCTACAGGAAGTGACCCAAGACC
TTCACTATGAAAACTTCCGTTCTGAGAGGCTGAAGAGAGGCGGCAGGAAAGTAGAGAATGAGGACATGAATAAAGACCAG
ATTTTGCTTGAAAAGGAGGCTGAGCTCCGCCGAATGCAAGAGATGATTGCGAGGATGCAGGCGCAGATGCAGATGCAGAT
GCAGGGCGGCGACACTGACAGCAGCACTCTTGGGCACCACGTGTGA

Library Parental gene expression (RPM)
SRP017611_liver 49 .69 RPM
SRP017611_kidney 113 .19 RPM
SRP017611_brain 86 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002608 ortholog_one2one 1 retrogene
retro_btau_1185,
Canis familiaris ENSCAFG00000012960 ortholog_one2one 1 retrogene
retro_cfam_1477,
Choloepus hoffmanni ENSCHOG00000008715 ortholog_one2one 5 retrogenes
retro_chof_1371, retro_chof_1579, retro_chof_2198, retro_chof_275, retro_chof_614,
Callithrix jacchus ENSCJAG00000006122 ortholog_one2one 1 retrogene
retro_cjac_1501,
Cavia porcellus ENSCPOG00000013687 ortholog_one2one 1 retrogene
retro_cpor_845,
Loxodonta africana ENSLAFG00000011964 ortholog_one2many 1 retrogene
retro_lafr_4,
Macropus eugenii ENSMEUG00000016519 ortholog_one2many 1 retrogene
retro_meug_39,
Myotis lucifugus ENSMLUG00000007108 ortholog_one2one 1 retrogene
retro_mluc_1594,
Monodelphis domestica ENSMODG00000016041 ortholog_one2one 1 retrogene
retro_mdom_888,
Mustela putorius furo ENSMPUG00000000166 ortholog_one2one 1 retrogene
retro_mputfur_436,
Nomascus leucogenys ENSNLEG00000013873 ortholog_one2one 1 retrogene
retro_nleu_1848,
Otolemur garnettii ENSOGAG00000004457 ortholog_one2one 1 retrogene
retro_ogar_2239,
Pteropus vampyrus ENSPVAG00000000558 ortholog_one2one 1 retrogene
retro_pvam_448,
Rattus norvegicus ENSRNOG00000006545 within_species_paralog 9 retrogenes
retro_rnor_1424, retro_rnor_1425, retro_rnor_1426, retro_rnor_1427, retro_rnor_1428, retro_rnor_1431, retro_rnor_1445, retro_rnor_1446, retro_rnor_821,
Ictidomys tridecemlineatus ENSSTOG00000013357 ortholog_one2one 1 retrogene
retro_itri_1227,
Drosophila melanogaster FBgn0011710 ortholog_one2one 1 retrogene
retro_dmel_35,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1110 88.16 67.59
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Download FASTA sequences of all ENSRNOG00000017952 retrocopies