Parental gene:

BT.20352, ENSBTAG00000002608

Aliases:None
Description:septin-2 [Source:RefSeq peptide;Acc:NP_001039557]
Organism:Cow (Bos taurus)
Coordinates:3:120968023..120988257(+)


>ENSBTAG00000002608
ATGTCTAAGCAACAACAAACTCAGTTTATAAATCCAGAAACTCCTGGATATGTTGGATTTGCAAATCTTCCCAATCAAGT
TCACCGAAAATCAGTGAAAAAAGGTTTTGAATTCACACTGATGGTGGTTGGTGAATCGGGGCTCGGAAAATCGACGCTCA
TCAACAGCCTCTTCTTGACCGACCTCTACCCAGAAAGAGTCATCCCTGGAGCTGCAGAGAAAATTGAAAGAACCGTCCAG
ATTGAGGCTTCCACTGTTGAGATTGAAGAGCGCGGGGTGAAGCTGCGTCTGACCGTGGTGGACACCCCGGGCTATGGGGA
TGCCATCAACTGCAGGGACTGCTTTAAAACCATCATCTGCTACATCGACGAGCAGTTCGAGCGGTACCTGCACGACGAGA
GCGGCCTGAACAGGCGGCACATCATCGACAACAGGGTGCACTGCTGCTTCTACTTCATCTCCCCCTTCGGGCACGGACTG
AAGCCACTGGATGTTGCGTTCATGAAGGCGATCCACAACAAGGTGAATATCGTGCCTGTCATCGCGAAAGCCGACAGTCT
GAAGAGAATGGCATTGAAACGTGTAAAATATCATATTCTGGATGAAATTGAGGAACATAACATCAAAATCTATCACTTAC
CTGACGCAGAGTCCGATGAAGATGAAGATTTTAAAGAGCAGACTCGACTTCTCAAGGCCAGCATCCCTTTCTCTGTGGTT
GGATCCAATCAGCTGATTGAAGCCAAAGGCAAGAAGGTCAGAGGCCGCCTCTACCCTTGGGGCGTCGTGGAGGTGGAGAA
CCCGGAGCACAACGACTTCCTGAAGCTGAGGACGATGCTCATCACTCACATGCAGGATCTCCAGGAGGTGACCCAGGACC
TGCACTATGAGAACTTCCGGTCCGAGAGGCTCAAGAGAGGCGGCAGGAAAGTAGAAAATGAGGACATGAATAAAGACCAG
ATACTGCTGGAGAAGGAAGCTGAGCTCCGCCGCATGCAGGAGATGATTGCGCGGATGCAGGCACAGATGCAGCTGCAGCT
GCAGGGCGGCGACGGCGACAGCGGGGTCCACGGGCAGCACGTGTGA

Library Parental gene expression (RPM)
SRP017611_brain 77 .61 RPM
SRP017611_kidney 78 .00 RPM
SRP017611_liver 35 .49 RPM
ERP005899_muscle 53 .79 RPM
ERP005899_liver 13 .27 RPM
SRP030211_testis 153 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000004291 other_paralog 1 retrogene
retro_btau_627,
Canis familiaris ENSCAFG00000012960 ortholog_one2one 1 retrogene
retro_cfam_1477,
Choloepus hoffmanni ENSCHOG00000008715 ortholog_one2one 5 retrogenes
retro_chof_1371, retro_chof_1579, retro_chof_2198, retro_chof_275, retro_chof_614,
Callithrix jacchus ENSCJAG00000006122 ortholog_one2one 1 retrogene
retro_cjac_1501,
Cavia porcellus ENSCPOG00000013687 ortholog_one2one 1 retrogene
retro_cpor_845,
Loxodonta africana ENSLAFG00000011964 ortholog_one2many 1 retrogene
retro_lafr_4,
Macropus eugenii ENSMEUG00000016519 ortholog_one2many 1 retrogene
retro_meug_39,
Myotis lucifugus ENSMLUG00000007108 ortholog_one2one 1 retrogene
retro_mluc_1594,
Monodelphis domestica ENSMODG00000016041 ortholog_one2one 1 retrogene
retro_mdom_888,
Mustela putorius furo ENSMPUG00000000166 ortholog_one2one 1 retrogene
retro_mputfur_436,
Nomascus leucogenys ENSNLEG00000013873 ortholog_one2one 1 retrogene
retro_nleu_1848,
Otolemur garnettii ENSOGAG00000004457 ortholog_one2one 1 retrogene
retro_ogar_2239,
Pteropus vampyrus ENSPVAG00000000558 ortholog_one2one 1 retrogene
retro_pvam_448,
Rattus norvegicus ENSRNOG00000017952 ortholog_one2one 1 retrogene
retro_rnor_1110,
Ictidomys tridecemlineatus ENSSTOG00000013357 ortholog_one2one 1 retrogene
retro_itri_1227,
Drosophila melanogaster FBgn0011710 ortholog_one2one 1 retrogene
retro_dmel_35,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1185 75.89 100.00
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Download FASTA sequences of all ENSBTAG00000002608 retrocopies