Parental gene:

gtf2a2, ENSXETG00000022002

Aliases:None
Description:general transcription factor IIA, 2, 12kDa [Source:RefSeq peptide;Acc:NP_001005107]
Organism:Xenopus (Xenopus tropicalis)
Coordinates:GL184004.1:34..5601(-)


>ENSXETG00000022002
ATGGCTTATCAACTGTACAGGAATACGACACTGGGTAACAGTCTTCAGGAAAGCTTGGATGAGCTAATACAGTCTCAACA
GATCAACCCTCAACTTGCACTTCAGGTTCTGCTACAGTTTGACAAGGCTATTAATTCAGCATTGGCACAGCGGGTCAGAA
ACAGAGTCAACTTTAGGGGATCCTTAAACACTTATAGGTTTTGTGACAATGTATGGACCTTTGTGTTGAACGATGTCGAG
TTCAGAGAGGTTACTGACCTAGTGAAGGTGGATAAAGTTAAAATTGTTGCCTGTGATGGAAAAAACACCGGTTCAAACAC
TGCAGAGTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_heart 0 .13 RPM
SRP007412_kidney 0 .13 RPM
SRP007412_liver 0 .00 RPM
SRP007412_skeletal_muscle 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010298 ortholog_one2many 1 retrogene
retro_btau_1649,
Canis familiaris ENSCAFG00000016665 ortholog_one2many 2 retrogenes
retro_cfam_786, retro_cfam_912,
Cavia porcellus ENSCPOG00000000816 ortholog_one2many 1 retrogene
retro_cpor_525,
Dipodomys ordii ENSDORG00000007867 ortholog_one2many 3 retrogenes
retro_dord_377, retro_dord_385, retro_dord_695,
Homo sapiens ENSG00000140307 ortholog_one2many 1 retrogene
retro_hsap_4034,
Macaca mulatta ENSMMUG00000018428 ortholog_one2many 1 retrogene
retro_mmul_2303,
Monodelphis domestica ENSMODG00000011636 ortholog_one2many 1 retrogene
retro_mdom_1563,
Otolemur garnettii ENSOGAG00000007061 ortholog_one2many 1 retrogene
retro_ogar_1752,
Ochotona princeps ENSOPRG00000012841 ortholog_one2many 1 retrogene
retro_opri_908,
Pan troglodytes ENSPTRG00000007129 ortholog_one2many 1 retrogene
retro_ptro_2734,
Rattus norvegicus ENSRNOG00000011062 ortholog_one2many 2 retrogenes
retro_rnor_1021, retro_rnor_1141,
Sorex araneus ENSSARG00000012228 ortholog_one2many 2 retrogenes
retro_sara_607, retro_sara_734,
Sus scrofa ENSSSCG00000004583 ortholog_one2many 3 retrogenes
retro_sscr_545, retro_sscr_934, retro_sscr_935,
Ictidomys tridecemlineatus ENSSTOG00000004010 ortholog_one2many 3 retrogenes
retro_itri_1631, retro_itri_440, retro_itri_925,
Tupaia belangeri ENSTBEG00000001053 ortholog_one2many 9 retrogenes
retro_tbel_1162, retro_tbel_1207, retro_tbel_123, retro_tbel_1394, retro_tbel_1439, retro_tbel_257, retro_tbel_2655, retro_tbel_2737, retro_tbel_513,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_xtro_18 74.39 75.23
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Download FASTA sequences of all ENSXETG00000022002 retrocopies