Parental gene:

MMU.10042, ENSMMUG00000018428

Aliases:None
Description:transcription initiation factor IIA subunit 2 [Source:RefSeq peptide;Acc:NP_001244983]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:7:38018911..38031471(-)


>ENSMMUG00000018428
ATGGCATATCAGTTATACAGAAATACCACTTTGGGAAACAGTCTTCAGGAGAGCCTAGATGAGCTCATACAGTCTCAACA
GATCACCCCCCAACTTGCCCTTCAAGTTCTACTTCAGTTTGATAAGGCTATAAATTCAGCATTGGCTCAGAGGGTCAGGA
ACAGAGTCAATTTCAGGGGCTCTCTAAATACGTACAGATTCTGCGATAATGTGTGGACTTTTGTATTGAATGATGTTGAA
TTCAGAGAGGTGACAGAACTTATTAAAGTGGATAAAGTGAAAATTGTAGCCTGTGATGGTAAAAATACTGGCTCCAATAC
TACAGAATGA

Library Parental gene expression (RPM)
SRP007412_brain 6 .72 RPM
SRP007412_brain_prefrontal_cortex 3 .97 RPM
SRP007412_cerebellum 6 .91 RPM
SRP007412_heart 6 .07 RPM
SRP007412_kidney 10 .80 RPM
SRP007412_liver 2 .49 RPM
SRP007412_testis 57 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010298 ortholog_one2one 1 retrogene
retro_btau_1649,
Canis familiaris ENSCAFG00000016665 ortholog_one2one 2 retrogenes
retro_cfam_786, retro_cfam_912,
Cavia porcellus ENSCPOG00000000816 ortholog_one2one 1 retrogene
retro_cpor_525,
Dipodomys ordii ENSDORG00000007867 ortholog_one2one 3 retrogenes
retro_dord_377, retro_dord_385, retro_dord_695,
Homo sapiens ENSG00000140307 ortholog_one2one 1 retrogene
retro_hsap_4034,
Monodelphis domestica ENSMODG00000011636 ortholog_one2one 1 retrogene
retro_mdom_1563,
Otolemur garnettii ENSOGAG00000007061 ortholog_one2one 1 retrogene
retro_ogar_1752,
Ochotona princeps ENSOPRG00000012841 ortholog_one2one 1 retrogene
retro_opri_908,
Pan troglodytes ENSPTRG00000007129 ortholog_one2one 1 retrogene
retro_ptro_2734,
Rattus norvegicus ENSRNOG00000011062 ortholog_one2one 2 retrogenes
retro_rnor_1021, retro_rnor_1141,
Sorex araneus ENSSARG00000012228 ortholog_one2one 2 retrogenes
retro_sara_607, retro_sara_734,
Sus scrofa ENSSSCG00000004583 ortholog_one2one 3 retrogenes
retro_sscr_545, retro_sscr_934, retro_sscr_935,
Ictidomys tridecemlineatus ENSSTOG00000004010 ortholog_one2one 3 retrogenes
retro_itri_1631, retro_itri_440, retro_itri_925,
Tupaia belangeri ENSTBEG00000001053 ortholog_one2one 9 retrogenes
retro_tbel_1162, retro_tbel_1207, retro_tbel_123, retro_tbel_1394, retro_tbel_1439, retro_tbel_257, retro_tbel_2655, retro_tbel_2737, retro_tbel_513,
Xenopus tropicalis ENSXETG00000022002 ortholog_one2many 1 retrogene
retro_xtro_18,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2303 96.39 76.15
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Download FASTA sequences of all ENSMMUG00000018428 retrocopies