Parental gene:

Cwc15, ENSRNOG00000008490

Aliases:Cwc15, RGD1310669
Description:Spliceosome-associated protein CWC15 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q5BJP2]
Organism:Rat (Rattus norvegicus)
Coordinates:8:12939500..12950303(+)


>ENSRNOG00000008490
ATGACAACAGCAGCCAGGCCAACTTTTGAACCTGCAAGAGGTGGGAGAGGAAAAGGAGAAGGTGATTTGAGCCAGCTCTC
CAAGCAGTATTCAAGCAGAGACCTTCCCTCTCATACAAAGATAAAGTACAGACAAACCACACAGGATGCCCCTGAAGAGG
TTCGCAACCGTGACTTCAGGAGAGAGTTGGAAGAGAGGGAGAGAGCTGCTGCAAGGGAGAAAAATAGGGACCGTCCAACC
CGAGAACACACAACTTCCTCTTCGGTGTCCAAGAAGCCCCGCTTAGACCAGATTCCTGCTGCCAACCTTGATGCTGACGA
TCCTCTCACAGATGAGGAAGATGAGGATTTTGAAGAGGAAAGCGATGACGATGACACTGCAGCTCTTCTTGCAGAGCTAG
AAAAGATCAAGAAGGAGAGAGCTGAAGAGCAGGCCAGAAAGGAGCAAGAACAAAAAGCAGAGGAAGAGAGAATTCGCATG
GAAAACATTCTGAGTGGAAACCCTCTCCTGAATCTCACGGGCCCGTCCCAGCCTCAGGCCAACTTCAAGGTTAAAAGAAG
GTGGGACGATGATGTTGTTTTTAAGAACTGTGCAAAGGGTATAGATGATCAAAAGAAAGACAAAAGATTTGTAAACGATA
CGCTGCGATCTGAATTTCACAAAAAGTTCATGGAGAAATATATCAAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 27 .39 RPM
SRP017611_kidney 29 .66 RPM
SRP017611_liver 16 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011392 possible_ortholog 1 retrogene
retro_amel_1913,
Bos taurus ENSBTAG00000007913 possible_ortholog 1 retrogene
retro_btau_703,
Canis familiaris ENSCAFG00000004134 possible_ortholog 6 retrogenes
retro_cfam_1329, retro_cfam_2123, retro_cfam_503, retro_cfam_537, retro_cfam_61, retro_cfam_805,
Callithrix jacchus ENSCJAG00000004188 ortholog_one2many 1 retrogene
retro_cjac_2802,
Cavia porcellus ENSCPOG00000006249 ortholog_one2many 1 retrogene
retro_cpor_708,
Dipodomys ordii ENSDORG00000011075 possible_ortholog 1 retrogene
retro_dord_313,
Echinops telfairi ENSETEG00000006649 ortholog_many2many 1 retrogene
retro_etel_647,
Felis catus ENSFCAG00000007826 possible_ortholog 1 retrogene
retro_fcat_1416,
Myotis lucifugus ENSMLUG00000002032 possible_ortholog 3 retrogenes
retro_mluc_102, retro_mluc_2143, retro_mluc_2478,
Mus musculus ENSMUSG00000004096 ortholog_one2many 2 retrogenes
retro_mmus_2482, retro_mmus_593,
Ornithorhynchus anatinus ENSOANG00000010404 ortholog_many2many 1 retrogene
retro_oana_5,
Oryctolagus cuniculus ENSOCUG00000001629 possible_ortholog 4 retrogenes
retro_ocun_1037, retro_ocun_1605, retro_ocun_679, retro_ocun_743,
Otolemur garnettii ENSOGAG00000001686 ortholog_one2many 2 retrogenes
retro_ogar_2476, retro_ogar_456,
Sarcophilus harrisii ENSSHAG00000016534 ortholog_many2many 5 retrogenes
retro_shar_26, retro_shar_333, retro_shar_447, retro_shar_596, retro_shar_768,
Tarsius syrichta ENSTSYG00000000407 ortholog_many2many 1 retrogene
retro_tsyr_1585,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_251 81.66 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_rnor_476 91.71 83.84
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_rnor_2452 66.39 50.22
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000008490 retrocopies