Parental gene:

Cwc15, ENSMUSG00000004096

Aliases:Cwc15, 0610040D20Rik, 2900052N06Rik, Ed1, c11orf5, mED1
Description:CWC15 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913320]
Organism:Mouse (Mus musculus)
Coordinates:9:14500616..14510577(+)


>ENSMUSG00000004096
ATGACAACAGCAGCCAGGCCAACTTTTGAACCTGCAAGAGGTGGGAGAGGAAAAGGAGAAGGGGATTTGAGCCAGCTCTC
CAAGCAGTATTCAAGCAGAGATCTTCCCTCTCATACAAAGATAAAGTACAGACAAACCACACAGGATGCCCCTGAAGAGG
TTCGAAACCGTGACTTCAGGAGAGAACTGGAAGAGAGAGAGAGAGCTGCTGCAAGGGACAAAAACAGGGACCGCCCAACT
CGAGAGCATACAACTTCCTCTTCAGTGTCAAAGAAGCCCCGCTTAGACCAGATTCCTGCTGCCAACCTTGATGCTGACGA
TCCTCTCACAGACGAGGAAGATGAAGATTTTGAAGAGGAGAGCGATGACGATGATACTGCAGCTCTTCTCGCAGAGCTAG
AAAAGATCAAGAAGGAAAGAGCTGAAGAGCAGGCCAGGAAGGAACAAGAACAAAAAGCAGAGGAAGAGAGAATTCGCATG
GAAAACATTCTGAGTGGAAACCCTCTCCTAAACCTCACTGGCCCGTCCCAGCCTCAGGCCAACTTCAAGGTTAAAAGAAG
ATGGGATGATGATGTCGTTTTTAAGAACTGTGCAAAAGGTATAGATGACCAGAAGAAAGACAAACGATTTGTAAATGATA
CACTGCGATCTGAATTTCACAAGAAGTTCATGGAGAAATATATTAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain 36 .40 RPM
SRP007412_cerebellum 47 .59 RPM
SRP007412_heart 37 .45 RPM
SRP007412_kidney 51 .55 RPM
SRP007412_liver 44 .90 RPM
SRP007412_testis 59 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007913 possible_ortholog 1 retrogene
retro_btau_703,
Canis familiaris ENSCAFG00000004134 possible_ortholog 6 retrogenes
retro_cfam_1329, retro_cfam_2123, retro_cfam_503, retro_cfam_537, retro_cfam_61, retro_cfam_805,
Callithrix jacchus ENSCJAG00000004188 ortholog_one2one 1 retrogene
retro_cjac_2802,
Cavia porcellus ENSCPOG00000006249 ortholog_one2one 1 retrogene
retro_cpor_708,
Echinops telfairi ENSETEG00000006649 ortholog_one2many 1 retrogene
retro_etel_647,
Felis catus ENSFCAG00000007826 possible_ortholog 1 retrogene
retro_fcat_1416,
Myotis lucifugus ENSMLUG00000002032 possible_ortholog 3 retrogenes
retro_mluc_102, retro_mluc_2143, retro_mluc_2478,
Ornithorhynchus anatinus ENSOANG00000010404 ortholog_one2many 1 retrogene
retro_oana_5,
Otolemur garnettii ENSOGAG00000001686 ortholog_one2one 2 retrogenes
retro_ogar_2476, retro_ogar_456,
Rattus norvegicus ENSRNOG00000008490 ortholog_one2many 3 retrogenes
retro_rnor_2452, retro_rnor_251, retro_rnor_476,
Sarcophilus harrisii ENSSHAG00000016534 ortholog_one2many 5 retrogenes
retro_shar_26, retro_shar_333, retro_shar_447, retro_shar_596, retro_shar_768,
Tarsius syrichta ENSTSYG00000000407 ortholog_one2many 1 retrogene
retro_tsyr_1585,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_593 61.16 51.09
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2. retro_mmus_2482 88.97 58.95
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Download FASTA sequences of all ENSMUSG00000004096 retrocopies