Parental gene:

RPS7, ENSPTRG00000011615

Aliases:None
Description:Pan troglodytes ribosomal protein S7 (RPS7), mRNA. [Source:RefSeq mRNA;Acc:NM_001252001]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2A:3087943..3093612(+)


>ENSPTRG00000011615
ATGTTCAGTTCGAGCGCCAAGATTGTGAAGCCCAATGGCGAGAAGCCGGACGAGTTCGAGTCCGGCATCTCCCAGGCTCT
TCTGGAGCTGGAGATGAACTCGGACCTCAAGGCTCAGCTCAGGGAGCTGAATATTACGGCAGCTAAGGAAATTGAAGTTG
GTGGTGGTCGGAAAGCTATCATAATCTTTGTTCCCGTTCCTCAACTGAAATCTTTCCAGAAAATCCAAGTCCGGCTAGTA
CGCGAATTGGAGAAAAAGTTCAGTGGGAAGCATGTCGTCTTTATCGCTCAGAGGAGAATTCTGCCTAAGCCAACTCGAAA
AAGCCGTACAAAAAATAAGCAAAAGCGTCCCAGGAGCCGTACTCTGACAGCTGTGCACGATGCCATCCTTGAGGACTTGG
TCTTCCCAAGCGAAATTGTGGGCAAGAGAATCCGCGTCAAACTAGATGGCAGCCGGCTCATAAAGGTTCATTTGGACAAA
GCACAGCAGAACAATGTGGAACACAAGGTTGAAACTTTTTCTGGTGTCTATAAGAAGCTCACGGGCAAGGATGTTAATTT
TGAATTCCCAGAGTTTCAATTGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 79 .49 RPM
SRP007412_cerebellum 27 .07 RPM
SRP007412_heart 17 .72 RPM
SRP007412_kidney 102 .93 RPM
SRP007412_liver 30 .70 RPM
SRP007412_testis 18 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018435 possible_ortholog 2 retrogenes
retro_amel_391, retro_amel_914,
Bos taurus ENSBTAG00000016224 possible_ortholog 5 retrogenes
retro_btau_1016, retro_btau_1046, retro_btau_1351, retro_btau_448, retro_btau_997,
Canis familiaris ENSCAFG00000003263 possible_ortholog 1 retrogene
retro_cfam_1798,
Callithrix jacchus ENSCJAG00000016462 ortholog_one2many 2 retrogenes
retro_cjac_16, retro_cjac_2287,
Cavia porcellus ENSCPOG00000009795 possible_ortholog 2 retrogenes
retro_cpor_1139, retro_cpor_773,
Dasypus novemcinctus ENSDNOG00000013285 possible_ortholog 14 retrogenes
retro_dnov_1091, retro_dnov_1351, retro_dnov_1388, retro_dnov_1459, retro_dnov_1688, retro_dnov_1849, retro_dnov_1940, retro_dnov_1970, retro_dnov_238, retro_dnov_2409, retro_dnov_558, retro_dnov_582, retro_dnov_623, retro_dnov_791,
Equus caballus ENSECAG00000020253 possible_ortholog 2 retrogenes
retro_ecab_276, retro_ecab_396,
Loxodonta africana ENSLAFG00000015087 ortholog_one2one 11 retrogenes
retro_lafr_1223, retro_lafr_160, retro_lafr_217, retro_lafr_318, retro_lafr_319, retro_lafr_413, retro_lafr_514, retro_lafr_720, retro_lafr_786, retro_lafr_964, retro_lafr_970,
Myotis lucifugus ENSMLUG00000006121 possible_ortholog 1 retrogene
retro_mluc_1118,
Macaca mulatta ENSMMUG00000011870 possible_ortholog 7 retrogenes
retro_mmul_1831, retro_mmul_1846, retro_mmul_1929, retro_mmul_23, retro_mmul_2403, retro_mmul_2540, retro_mmul_357,
Monodelphis domestica ENSMODG00000014495 ortholog_one2many 2 retrogenes
retro_mdom_662, retro_mdom_810,
Mus musculus ENSMUSG00000061477 possible_ortholog 2 retrogenes
retro_mmus_271, retro_mmus_53,
Nomascus leucogenys ENSNLEG00000015407 possible_ortholog 10 retrogenes
retro_nleu_1505, retro_nleu_1771, retro_nleu_1783, retro_nleu_2278, retro_nleu_2346, retro_nleu_2510, retro_nleu_2892, retro_nleu_3080, retro_nleu_817, retro_nleu_835,
Oryctolagus cuniculus ENSOCUG00000008507 possible_ortholog 2 retrogenes
retro_ocun_203, retro_ocun_230,
Otolemur garnettii ENSOGAG00000028165 ortholog_one2one 1 retrogene
retro_ogar_133,
Pongo abelii ENSPPYG00000025872 possible_ortholog 12 retrogenes
retro_pabe_1033, retro_pabe_1555, retro_pabe_2506, retro_pabe_2982, retro_pabe_2983, retro_pabe_31, retro_pabe_313, retro_pabe_360, retro_pabe_3659, retro_pabe_3803, retro_pabe_499, retro_pabe_524,
Rattus norvegicus ENSRNOG00000008551 possible_ortholog 2 retrogenes
retro_rnor_39, retro_rnor_391,
Sus scrofa ENSSSCG00000027353 possible_ortholog 5 retrogenes
retro_sscr_136, retro_sscr_137, retro_sscr_240, retro_sscr_364, retro_sscr_956,
Ictidomys tridecemlineatus ENSSTOG00000024830 possible_ortholog 3 retrogenes
retro_itri_1147, retro_itri_1161, retro_itri_1215,
Tursiops truncatus ENSTTRG00000001616 possible_ortholog 6 retrogenes
retro_ttru_1422, retro_ttru_1659, retro_ttru_1706, retro_ttru_301, retro_ttru_323, retro_ttru_773,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_58 97.94 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ptro_202 57.94 53.61
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_ptro_3132 74.21 77.32
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000011615 retrocopies