Parental gene:

Ube2l3, ENSMUSG00000038965

Aliases:Ube2l3, C79827, UbcM4, Ubce7
Description:ubiquitin-conjugating enzyme E2L 3 [Source:MGI Symbol;Acc:MGI:109240]
Organism:Mouse (Mus musculus)
Coordinates:16:17152012..17202649(-)


>ENSMUSG00000038965
ATGGCGGCCAGCAGGAGGCTGATGAAGGAGCTTGAAGAGATCCGCAAATGTGGAATGAAAAACTTCCGTAACATCCAGGT
TGATGAAGCTAATTTATTGACTTGGCAAGGGCTTATTGTTCCTGACAACCCTCCATATGATAAGGGAGCCTTCAGAATTG
AAATCAACTTTCCAGCAGAGTATCCATTCAAACCACCCAAGATCACATTTAAAACAAAGATCTACCACCCTAACATCGAT
GAGAAGGGGCAGGTCTGTCTGCCAGTCATTAGTGCTGAAAACTGGAAGCCAGCCACCAAGACTGACCAAGTAATCCAGTC
CCTCATAGCACTGGTGAATGACCCCCAGCCTGAGCACCCACTCCGGGCTGACCTAGCTGAAGAATACTCTAAGGACCGTA
AAAAATTCTGTAAGAATGCTGAAGAGTTTACAAAGAAATATGGGGAAAAGCGACCTGTGGACTAA

Library Parental gene expression (RPM)
SRP007412_brain 43 .50 RPM
SRP007412_cerebellum 41 .73 RPM
SRP007412_heart 24 .81 RPM
SRP007412_kidney 25 .72 RPM
SRP007412_liver 19 .47 RPM
SRP007412_testis 11 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015284 ortholog_one2one 1 retrogene
retro_cfam_1090,
Callithrix jacchus ENSCJAG00000015818 ortholog_one2one 9 retrogenes
retro_cjac_1813, retro_cjac_1815, retro_cjac_1998, retro_cjac_2073, retro_cjac_2511, retro_cjac_2576, retro_cjac_2856, retro_cjac_3174, retro_cjac_3296,
Cavia porcellus ENSCPOG00000006044 ortholog_one2one 2 retrogenes
retro_cpor_692, retro_cpor_835,
Dipodomys ordii ENSDORG00000011406 ortholog_one2one 1 retrogene
retro_dord_357,
Equus caballus ENSECAG00000019274 possible_ortholog 1 retrogene
retro_ecab_116,
Felis catus ENSFCAG00000008008 ortholog_one2one 1 retrogene
retro_fcat_369,
Gorilla gorilla ENSGGOG00000028073 ortholog_one2one 3 retrogenes
retro_ggor_1425, retro_ggor_861, retro_ggor_924,
Myotis lucifugus ENSMLUG00000001547 possible_ortholog 1 retrogene
retro_mluc_32,
Monodelphis domestica ENSMODG00000017665 ortholog_one2one 2 retrogenes
retro_mdom_2029, retro_mdom_956,
Mus musculus ENSMUSG00000019927 within_species_paralog 22 retrogenes
retro_mmus_3405, retro_mmus_3406, retro_mmus_3407, retro_mmus_3409, retro_mmus_3430, retro_mmus_3432, retro_mmus_3434, retro_mmus_3435, retro_mmus_3436, retro_mmus_3563, retro_mmus_3564, retro_mmus_3565, retro_mmus_3566, retro_mmus_3567, retro_mmus_3587, retro_mmus_3589, retro_mmus_3590, retro_mmus_3591, retro_mmus_3592, retro_mmus_3593, retro_mmus_3594, retro_mmus_3595,
Mus musculus ENSMUSG00000021774 other_paralog 3 retrogenes
retro_mmus_2493, retro_mmus_2600, retro_mmus_537,
Mus musculus ENSMUSG00000027011 other_paralog 4 retrogenes
retro_mmus_2814, retro_mmus_3123, retro_mmus_3416, retro_mmus_3571,
Mus musculus ENSMUSG00000078578 within_species_paralog 11 retrogenes
retro_mmus_1818, retro_mmus_1895, retro_mmus_1913, retro_mmus_2293, retro_mmus_2635, retro_mmus_2643, retro_mmus_3119, retro_mmus_3636, retro_mmus_850, retro_mmus_875, retro_mmus_923,
Mus musculus ENSMUSG00000091896 within_species_paralog 3 retrogenes
retro_mmus_2267, retro_mmus_27, retro_mmus_629,
Nomascus leucogenys ENSNLEG00000000192 ortholog_one2one 1 retrogene
retro_nleu_97,
Pongo abelii ENSPPYG00000011602 ortholog_one2one 1 retrogene
retro_pabe_99,
Pan troglodytes ENSPTRG00000014114 ortholog_one2many 1 retrogene
retro_ptro_123,
Rattus norvegicus ENSRNOG00000001862 ortholog_one2one 4 retrogenes
retro_rnor_1602, retro_rnor_2633, retro_rnor_2799, retro_rnor_526,
Tetraodon nigroviridis ENSTNIG00000010600 ortholog_one2many 1 retrogene
retro_tnig_16,
Takifugu rubripes ENSTRUG00000003392 ortholog_one2one 1 retrogene
retro_trub_39,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_541 98.70 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmus_995 87.79 85.06
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_mmus_1619 86.54 100.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_mmus_1620 71.52 100.00
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_mmus_2147 83.23 100.00
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_mmus_2212 92.26 100.00
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_mmus_2272 98.05 100.00
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_mmus_2315 96.10 100.00
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_mmus_3205 93.51 100.00
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_mmus_3714 89.68 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMUSG00000038965 retrocopies