Parental gene:

CDK4, ENSBTAG00000007160

Aliases:None
Description:Cyclin-dependent kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q32KY4]
Organism:Cow (Bos taurus)
Coordinates:5:56039290..56042258(+)


>ENSBTAG00000007160
ATGGCTACCTCCCGATATGAGCCAGTGGCTGAGATTGGTGTCGGTGCCTATGGGACAGTGTACAAGGCCCGTGATCCCCA
CAGTGGCCACTTTGTGGCCCTCAAGAGTGTAAGAGTCCCCAATGGAGGAGGTGCTGGAGGGGGCCTGCCCATCAGCACCG
TTCGGGAGGTGGCCTTACTGCGGCGTCTGGAGGCTTTTGAGCATCCCAATGTTGTCAGGCTTATGGACGTCTGTGCAACA
GCCCGAACTGACCGGGAGACCAAAGTGACCCTGGTGTTTGAGCATGTGGACCAAGATCTCAGGACATATCTGGACAAGGC
ACCCCCACCAGGCTTGCCAGTGGAGACCATAAAAGATCTGATGCGCCAATTTCTAAGAGGCCTGGATTTCCTTCATGCCA
ACTGCATCGTTCACCGAGACCTGAAGCCAGAGAACATTCTGGTGACAAGTGGTGGGACAGTCAAGCTGGCTGACTTTGGC
CTGGCCAGAATCTACAGCTACCAGATGGCACTTACACCTGTGGTTGTTACACTCTGGTATCGTGCTCCAGAAGTTCTTTT
GCAGTCTACGTATGCAACACCCGTGGACATGTGGAGCGTTGGCTGTATCTTTGCAGAGATGTTTCGTCGAAAGCCTCTCT
TCTGTGGAAACTCTGAAGCTGACCAGTTAGGCAAAATCTTTGACCTGATTGGACTGCCCCCAGAGGATGACTGGCCCCGA
GATGTCTCTCTACCCCGAGGAGCCTTTTCCCCCCGAGGGCCCCGCCCAGTGCAGTCGGTGGTCCCTGAGCTGGAGGAATC
TGGAGCACAGCTGCTGCTGGAGATGCTGACTTTTAACCCACACAAGCGAATCTCTGCCTTCCGAGCCCTGCAGCACTCTT
ATCTACACAAGGCAGAAGGTGACGCAGAGTGA

Library Parental gene expression (RPM)
ERP005899_liver 16 .37 RPM
ERP005899_muscle 41 .76 RPM
SRP017611_brain 11 .56 RPM
SRP017611_kidney 36 .87 RPM
SRP017611_liver 21 .37 RPM
SRP030211_testis 16 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000004021 within_species_paralog 1 retrogene
retro_btau_1424,
Canis familiaris ENSCAFG00000000280 possible_ortholog 1 retrogene
retro_cfam_690,
Callithrix jacchus ENSCJAG00000006697 possible_ortholog 3 retrogenes
retro_cjac_2163, retro_cjac_2891, retro_cjac_2951,
Cavia porcellus ENSCPOG00000002670 ortholog_one2many 1 retrogene
retro_cpor_457,
Dasypus novemcinctus ENSDNOG00000014245 ortholog_one2many 1 retrogene
retro_dnov_145,
Felis catus ENSFCAG00000029663 possible_ortholog 1 retrogene
retro_fcat_516,
Gorilla gorilla ENSGGOG00000001404 possible_ortholog 1 retrogene
retro_ggor_275,
Macropus eugenii ENSMEUG00000014609 ortholog_many2many 1 retrogene
retro_meug_23,
Microcebus murinus ENSMICG00000003789 possible_ortholog 1 retrogene
retro_mmur_893,
Myotis lucifugus ENSMLUG00000023651 possible_ortholog 2 retrogenes
retro_mluc_1137, retro_mluc_354,
Macaca mulatta ENSMMUG00000023694 possible_ortholog 1 retrogene
retro_mmul_401,
Mus musculus ENSMUSG00000006728 possible_ortholog 5 retrogenes
retro_mmus_1219, retro_mmus_1298, retro_mmus_2878, retro_mmus_3109, retro_mmus_636,
Nomascus leucogenys ENSNLEG00000017205 possible_ortholog 1 retrogene
retro_nleu_1847,
Pan troglodytes ENSPTRG00000005147 possible_ortholog 1 retrogene
retro_ptro_180,
Tarsius syrichta ENSTSYG00000011937 possible_ortholog 3 retrogenes
retro_tsyr_1383, retro_tsyr_1701, retro_tsyr_544,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_738 92.08 100.00
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Download FASTA sequences of all ENSBTAG00000007160 retrocopies