Parental gene:

CHTOP, ENSVPAG00000010259

Aliases:None
Description:chromatin target of PRMT1 [Source:HGNC Symbol;Acc:24511]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_2266:46028..53137(+)


>ENSVPAG00000010259
ATGGCTGCACAGTCAGCGCCGAAAGTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCT
GAAGAACAAACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAACAACAGCAGCTAGCCAGTGCCAGAAACAGAA
GACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAGCAGAGCTTAAAGCAGCGCCTGGGT
AAGAGTAACATCCAGGCACGGTTAGGCCGACCCATAGGGGCCCTGGCCAGGGGAGCAATCGGTGGACGAGGCCTGCCCAT
AATCCAGAGAGGCTTGCCCAGAGGAGGACTACGTGGGGGACGTGCCACAAGAACCCTACTTAGGGGCGGGATGTCGCTCC
GAGGTCAAAACCTGCTCCGAGGTGGACGAGCCGTAGCTCCCCGAATGGGCTTAAGAAGAGGTGGTGTTCGAGGTCGTGGA
GGTCCTGGGAGAGGGGGCCTAGGGCGTGGAGCTATGGGTCGTGGCGGAATCGGTGGTAGAGGTCGGGGTATGATAGGTCG
GGGAAGAGGGGGCTTTGGAGGCAGAGGCCGAGGCCGTGGACGAGGGAGAGGTGCCCTTGCTCGCCCTGTACTGACCAAGG
AGCAGCTGGACAACCAATTGGATGCATACATGTCAAAAACAAAAGGACACCTGGATGCTGAGTTGGATGCCTACATGGCA
CAGACAGATCCCGAAACTAATGATTGA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013518 ortholog_one2many 1 retrogene
retro_chof_6,
Callithrix jacchus ENSCJAG00000010383 ortholog_one2one 3 retrogenes
retro_cjac_2059, retro_cjac_423, retro_cjac_431,
Dasypus novemcinctus ENSDNOG00000004834 ortholog_one2one 1 retrogene
retro_dnov_1054,
Equus caballus ENSECAG00000020889 ortholog_one2one 1 retrogene
retro_ecab_729,
Felis catus ENSFCAG00000002740 ortholog_one2one 1 retrogene
retro_fcat_1925,
Loxodonta africana ENSLAFG00000002658 ortholog_one2one 3 retrogenes
retro_lafr_131, retro_lafr_282, retro_lafr_656,
Myotis lucifugus ENSMLUG00000016098 ortholog_one2many 2 retrogenes
retro_mluc_201, retro_mluc_247,
Mus musculus ENSMUSG00000001017 ortholog_one2one 2 retrogenes
retro_mmus_1693, retro_mmus_1852,
Rattus norvegicus ENSRNOG00000012760 ortholog_one2many 1 retrogene
retro_rnor_1095,
Ictidomys tridecemlineatus ENSSTOG00000000660 ortholog_one2one 1 retrogene
retro_itri_1169,
Tupaia belangeri ENSTBEG00000012442 ortholog_one2one 1 retrogene
retro_tbel_293,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_353 88.35 81.85
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Download FASTA sequences of all ENSVPAG00000010259 retrocopies