Parental gene: | CHTOP, ENSDNOG00000004834 |
| Aliases: | None |
| Description: | chromatin target of PRMT1 [Source:HGNC Symbol;Acc:24511] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_6778:58465..65623(+) |
>ENSDNOG00000004834
ATGGCTGCACAATCAGCTCCGAAAGTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCT
GAAGAACAAACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAACAACAGCAGCTAGCCAGTGCCAGAAACAGAA
GACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAGCAGAGCTTAAAGCAGCGTCTGGGT
AAGAGTAACATCCAGGCACGGTTAGGCCGACCCATAGGGACCCTGGCCAGGGGAGCAATCGGAGGACGAGGCCTGCCCAT
AATCCAGAGAGGCTTGCCCAGAGGAGGACTACGTGGGGGACGTGCCACGAGAACCCTACTTAGGGGCGGGATGTCGCTCC
GAGGTCAAAACCTGCTTCGAGGTGGACGAGCCGTAGCTCCCCGAATGGGCTTGAGAAGAGGTGGTGTTCGAGGTCGTGGA
GGTCCTGGGAGAGGGGGCCTAGGGCGTGGAGCTATGGGTCGTGGCGGAATCGGTGGTAGAGGTCGGGGTATGATAGGTCG
GGGAAGAGGGGGCTTTGGAGGCAGAGGCAGAGGCCGTGGCCGAGGGAGAGGTGCCCTTACTCGCCCTGTACTGACCAAGG
AGCAGCTGGACAACCAGTTGGATGCATACATGTCGAAAACGAAAGGACACCTGGATGCAGAGTTGGATGCCTACATGGCG
CAGACAGATCCTGAAACCAATGATTGA
ATGGCTGCACAATCAGCTCCGAAAGTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCT
GAAGAACAAACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAACAACAGCAGCTAGCCAGTGCCAGAAACAGAA
GACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAGCAGAGCTTAAAGCAGCGTCTGGGT
AAGAGTAACATCCAGGCACGGTTAGGCCGACCCATAGGGACCCTGGCCAGGGGAGCAATCGGAGGACGAGGCCTGCCCAT
AATCCAGAGAGGCTTGCCCAGAGGAGGACTACGTGGGGGACGTGCCACGAGAACCCTACTTAGGGGCGGGATGTCGCTCC
GAGGTCAAAACCTGCTTCGAGGTGGACGAGCCGTAGCTCCCCGAATGGGCTTGAGAAGAGGTGGTGTTCGAGGTCGTGGA
GGTCCTGGGAGAGGGGGCCTAGGGCGTGGAGCTATGGGTCGTGGCGGAATCGGTGGTAGAGGTCGGGGTATGATAGGTCG
GGGAAGAGGGGGCTTTGGAGGCAGAGGCAGAGGCCGTGGCCGAGGGAGAGGTGCCCTTACTCGCCCTGTACTGACCAAGG
AGCAGCTGGACAACCAGTTGGATGCATACATGTCGAAAACGAAAGGACACCTGGATGCAGAGTTGGATGCCTACATGGCG
CAGACAGATCCTGAAACCAATGATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 52 .90 RPM |
| SRP012922_cerebellum | 82 .21 RPM |
| SRP012922_heart | 19 .72 RPM |
| SRP012922_kidney | 27 .38 RPM |
| SRP012922_liver | 24 .61 RPM |
| SRP012922_lung | 60 .33 RPM |
| SRP012922_quadricep_muscle | 48 .81 RPM |
| SRP012922_spleen | 75 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013518 | possible_ortholog | 1 retrogene | |
| Equus caballus | ENSECAG00000020889 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000002658 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000016098 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000012760 | possible_ortholog | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000010259 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1054 | 68.49 | 58.47 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000004834 retrocopies