Parental gene:

CHTOP, ENSCHOG00000013518

Aliases:None
Description:chromatin target of PRMT1 [Source:HGNC Symbol;Acc:24511]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:scaffold_24788:4119..9366(-)


>ENSCHOG00000013518
ATGGCTGCACAGTCAGCACCGAAAGTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCT
GAAGAACAAACAGCCGATGCCAGTGAATATTCGAGCTTCGATGCAGCAACAACAGCAGCTAGCCAGTGCCAGAAACAGAA
GACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAGCAGAGCTTAAAGCAGCGTCTGGGT
AAGAGTAACATCCAGGCACGGTTAGGCCGACCCATAGGGACCCTGGCCAGGGGAGCAATTGGAGGACGCGGCCTGCCCAT
AATCCAGAGAGGCTTGCCCAGAGGAGGACTACGTGGGGGACGTGCCACAAGAACCCTCCTTAGGGGCGGGATGTCGCTCC
GAGGTCAAAACCTGCTCCGAGGTGGACGAGCCGTAGCTCCCCGAATGGGCTTAAGAAGAGGTGGTGTTCGAGGTCGTGGA
GGTCCTGGGAGAGGGGGCCTAGGGCGTGGAGCTATGGGTCGTGGAGGAATCGGTGGTAGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010383 ortholog_one2one 3 retrogenes
retro_cjac_2059, retro_cjac_423, retro_cjac_431,
Dasypus novemcinctus ENSDNOG00000004834 possible_ortholog 1 retrogene
retro_dnov_1054,
Equus caballus ENSECAG00000020889 possible_ortholog 1 retrogene
retro_ecab_729,
Felis catus ENSFCAG00000002740 ortholog_one2one 1 retrogene
retro_fcat_1925,
Loxodonta africana ENSLAFG00000002658 possible_ortholog 3 retrogenes
retro_lafr_131, retro_lafr_282, retro_lafr_656,
Myotis lucifugus ENSMLUG00000016098 ortholog_many2many 2 retrogenes
retro_mluc_201, retro_mluc_247,
Mus musculus ENSMUSG00000001017 ortholog_one2one 2 retrogenes
retro_mmus_1693, retro_mmus_1852,
Rattus norvegicus ENSRNOG00000012760 ortholog_one2many 1 retrogene
retro_rnor_1095,
Ictidomys tridecemlineatus ENSSTOG00000000660 ortholog_one2one 1 retrogene
retro_itri_1169,
Tupaia belangeri ENSTBEG00000012442 ortholog_one2one 1 retrogene
retro_tbel_293,
Vicugna pacos ENSVPAG00000010259 ortholog_one2many 1 retrogene
retro_vpac_353,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_6 98.90 100.00
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Download FASTA sequences of all ENSCHOG00000013518 retrocopies