Parental gene:

Chtop, ENSRNOG00000012760

Aliases:Chtop, Fop, SRAG
Description:Friend of PRMT1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q498T2]
Organism:Rat (Rattus norvegicus)
Coordinates:2:209318320..209329789(-)


>ENSRNOG00000012760
ATGGCTGCACAGTCAGCGCCGAAAGTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCT
GAAGAACAAACAGCCGATGCCAGTGAATATTTGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAA
GACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAGCAGAGCTTAAAGCAGCGCCTGGGT
AAGAGTAATATCCAGGCACGGTTAGGCCGACCCATAGGTGCTCTGGCCAGGGGAGCAATTGGAGGAAGAAGCCTTCCCAT
AATCCAGAGAGGCTTGCCCCGAGGAGGACTACGTGGGGGACGTGCCACCAGAACCCTGCTTAGGGGTGGGATGTCGCTCC
GAGGTCAAAACCTGCTCCGAGGTGGACGAGCCGTAGCTCCCCGAATGGGCTTAAGAAGAGGTGGTGTTCGAGGTCGTGGA
GGTCCTGGGAGAGGGGGCCTAGGGCGTGGAGCTATGGGTCGTGGCGGAATCGGTGGTAGAGGTCGGGGTATGATAGGTCG
GGGAAGAGGGGGCTTTGGAGGCAGAGGCCGAGGTCGTGGCCGAGGGAGAGGTGCCCTCACTCGCCCTGTATTGACCAAGG
AGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAACTAAAGGACACCTGGATGCTGAATTGGATGCCTACATGGCA
CAGACAGATCCTGAAACCAATGATTGA

Library Parental gene expression (RPM)
SRP017611_liver 27 .03 RPM
SRP017611_kidney 50 .73 RPM
SRP017611_brain 76 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013518 ortholog_one2many 1 retrogene
retro_chof_6,
Callithrix jacchus ENSCJAG00000010383 ortholog_one2many 3 retrogenes
retro_cjac_2059, retro_cjac_423, retro_cjac_431,
Dasypus novemcinctus ENSDNOG00000004834 possible_ortholog 1 retrogene
retro_dnov_1054,
Equus caballus ENSECAG00000020889 possible_ortholog 1 retrogene
retro_ecab_729,
Felis catus ENSFCAG00000002740 ortholog_one2many 1 retrogene
retro_fcat_1925,
Loxodonta africana ENSLAFG00000002658 possible_ortholog 3 retrogenes
retro_lafr_131, retro_lafr_282, retro_lafr_656,
Myotis lucifugus ENSMLUG00000016098 ortholog_many2many 2 retrogenes
retro_mluc_201, retro_mluc_247,
Mus musculus ENSMUSG00000001017 ortholog_one2many 2 retrogenes
retro_mmus_1693, retro_mmus_1852,
Ictidomys tridecemlineatus ENSSTOG00000000660 ortholog_one2many 1 retrogene
retro_itri_1169,
Tupaia belangeri ENSTBEG00000012442 ortholog_one2many 1 retrogene
retro_tbel_293,
Vicugna pacos ENSVPAG00000010259 ortholog_one2many 1 retrogene
retro_vpac_353,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1095 77.71 70.16
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Download FASTA sequences of all ENSRNOG00000012760 retrocopies