Parental gene:

DKFZP459O0215, ENSPPYG00000017639

Aliases:None
Description:Septin-7 [Source:UniProtKB/Swiss-Prot;Acc:Q5R481]
Organism:Orangutan (Pongo abelii)
Coordinates:7:48133847..48210029(-)


>ENSPPYG00000017639
ATGGTAGTGGGTGAATCTGGATTGGGAAAGTCGACATTAATCAACTCATTATTCCTCACAGATTTGTATTCTCCAGAGTA
TCCAGGTCCTTCTCATAGAATTAAAAAGACTGTACAGGTGGAACAATCCAAAGTTTTAATCAAAGAAGGTGGTGTTCAGT
TGCTGCTCACAATAGTTGATACCCCAGGATTTGGAGATGCAGTGGATAATAGTAATTGCTGGCAGCCTGTTATCGACTAC
ATTGATAGTAAATTTGAGGACTACCTAAATGCAGAATCACGAGTGAACAGACGTCAGATGCCTGATAACAGGGTGCAGTG
TTGTTTATACTTCATTGCTCCTTCGGGACATGGACTTAAACCATTGGATATTGAGTTTATGAAGCGTTTGCATGAAAAAG
TGAATATCATCCCACTTATTGCCAAAGCAGACACACTCACACCAGAGGAATGCCAACAGTTTAAAAAACAGATAATGAAA
GAAATCCAAGAACATAAAATTAAAATATATGAATTTCCAGAAACAGATGATGAAGAAGAAAATAAACTTGTTAAAAAGAT
AAAGGACCGTTTACCTCTTGCTGTGGTAGGTAGTAATACTATCATTGAAGTTAATGGCAAAAGGGTCAGAGGAAGGCAGT
ATCCTTGGGGTGTTGCTGAAGTTGAAAATGGTGAACATTGTGATTTTACAATCCTAAGAAATATGTTGATAAGAACACAC
ATGCAGGACTTGAAAGATGTTACTAATAATGTCCACTATGAGAACTACAGAAGCAGAAAACTTGCAGCTGTGACTTATAA
TGGAGTTGATAACAACAAGAATAAAGGGCAGCTGACTAAGAGCCCTCTGGCACAAATGGAAGAAGAAAGAAGGGAGCATG
TAGCTAAAATGAAGAAAATGGAGATGGAGATGGAGCAGGTGTTTGAGATGAAGGTCAAAGAAAAAGTTCAAAAACTGAAG
GACTCTGAAGCTGAGCTCCAGCGGCGCCATGAGCAAATGAAAAAGAATTTGGAAGCACAGCACAAAGAATTGGAGGAAAA
ACGTCGTCAGTTTGAGGATGAGAAAGCAAACTGGGAAGCTCAACAACGTATTTTAGAACAACAGAACTCTTCGAGAACCT
TGGAAAAGAACAAGAAGAAAGGGAAGATCTTTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 160 .56 RPM
SRP007412_cerebellum 129 .75 RPM
SRP007412_heart 67 .13 RPM
SRP007412_kidney 36 .93 RPM
SRP007412_liver 32 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012276 possible_ortholog 2 retrogenes
retro_cjac_1259, retro_cjac_3809,
Equus caballus ENSECAG00000022693 ortholog_one2many 1 retrogene
retro_ecab_650,
Echinops telfairi ENSETEG00000015624 possible_ortholog 3 retrogenes
retro_etel_1263, retro_etel_282, retro_etel_517,
Homo sapiens ENSG00000122545 possible_ortholog 2 retrogenes
retro_hsap_3810, retro_hsap_4202,
Gorilla gorilla ENSGGOG00000001175 possible_ortholog 1 retrogene
retro_ggor_2816,
Monodelphis domestica ENSMODG00000021167 ortholog_one2many 1 retrogene
retro_mdom_1672,
Nomascus leucogenys ENSNLEG00000001673 possible_ortholog 1 retrogene
retro_nleu_2152,
Otolemur garnettii ENSOGAG00000006015 possible_ortholog 1 retrogene
retro_ogar_1193,
Pongo abelii ENSPPYG00000012144 other_paralog 1 retrogene
retro_pabe_3335,
Pan troglodytes ENSPTRG00000019080 possible_ortholog 2 retrogenes
retro_ptro_2585, retro_ptro_2853,
Rattus norvegicus ENSRNOG00000006545 possible_ortholog 9 retrogenes
retro_rnor_1424, retro_rnor_1425, retro_rnor_1426, retro_rnor_1427, retro_rnor_1428, retro_rnor_1431, retro_rnor_1445, retro_rnor_1446, retro_rnor_821,
Sarcophilus harrisii ENSSHAG00000003788 ortholog_one2many 1 retrogene
retro_shar_258,
Ictidomys tridecemlineatus ENSSTOG00000021378 possible_ortholog 3 retrogenes
retro_itri_1332, retro_itri_1736, retro_itri_1771,
Tursiops truncatus ENSTTRG00000016197 ortholog_one2many 1 retrogene
retro_ttru_329,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3438 81.75 65.10
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Download FASTA sequences of all ENSPPYG00000017639 retrocopies