Parental gene:

SEPT7, ENSMODG00000021167

Aliases:None
Description:septin 7 [Source:HGNC Symbol;Acc:1717]
Organism:Opossum (Monodelphis domestica)
Coordinates:6:289255381..289335925(+)


>ENSMODG00000021167
ATGTCGGTCAGTGAGCGAGCGGCTGAGGAGAGGAGCGGCGGCGGCTGCGGCGGCGGCGGCGCCATGGGTCAACAGAAGAA
CCTTGAAGGCTATGTGGGATTTGCGAATCTCCCAAATCAAGTATACCGAAAATCTGTGAAGAGAGGGTTTGAATTCACGC
TTATGGTAGTAGGAGAATCTGGATTGGGGAAGTCAACGTTAATCAACTCATTATTCCTAACAGACTTGTATTCTTCAGAG
TACCCAGGGCCTTCACATAGAATTAAAAAGACCGTACAGGTGGAACAAGCAAAAGTTTTAATCAAAGAAGGTGGTGTGCA
GCTGCTGCTCACAATAGTGGATACGCCTGGGTTCGGTGATGCAGTGGACAATAGTAATTGTTGGCAGCCTGTTATCGACT
ACATTGACAGTAAATTTGAGGATTATCTGAACGCAGAATCTCGGGTGAACAGACGGCAGATGCCAGACAGCAGGGTGCAA
TGTTGTTTATACTTCATTGCCCCTTCAGGCCATGGCCTCAAGCCTCTGGACATCGAGTTCATGAAACGCTTGCATGACAA
GGTGAACGTCATTCCGCTCATTGCCAAAGCGGACACACTGACTCCTGAGGAATGCCAGCAGTTTAAGAAGCAGATAATGA
AAGAAATTCAAGAGCATAAAATAAAAATATACGAGTTTCCAGAAACAGATGATGAAGAAGAAAATAAGCTTGTTAAAAAG
ATAAAGGACCGTTTGCCTCTTGCTGTGGTTGGTAGCAATACTATCATTGAAGTTAATGGCAAAAGGGTTCGAGGAAGACA
GTATCCTTGGGGTGTTGCAGAAGTTGAAAATGGTGAACATTGCGATTTTACAATTCTAAGAAACATGTTGATAAGAACCC
ACATGCAGGACCTGAAGGACGTGACGAGCAACGTGCACTACGAGAACTACAGGAGCCGGAAGCTGGCAGCTGTGACGTAC
AATAGTGTAGATAACAACAAGAACAAAGGGCAGCTGACCAAGAGCCCTCTGGCCCAAATGGAGGAAGAAAGAAGGGAGCA
TGTAGCGAAGATGAAGAAGATGGAGATGGAGATGGAGCAAGTGTTCGAGATGAAGGTCAAAGAAAAGGTTCAGAAGCTCA
AGGACTCGGAAGCCGAGCTGCAGCGGCGTCATGAGCAGATGAAGAAGAACCTGGAAGCCCAGCACAAGGAACTGGAGGAG
AAGCGGCGCCAGTTTGAGGATGACAAAGCCAACTGGGAAGCTCAGCAGCGGATCTTGGAGCAACAAAACACTTCCAGAAC
TTTGGAAAAGAACAAGAAGAAAGGGAAGATCTTTTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012276 ortholog_one2many 2 retrogenes
retro_cjac_1259, retro_cjac_3809,
Equus caballus ENSECAG00000022693 ortholog_one2one 1 retrogene
retro_ecab_650,
Echinops telfairi ENSETEG00000015624 ortholog_one2one 3 retrogenes
retro_etel_1263, retro_etel_282, retro_etel_517,
Homo sapiens ENSG00000122545 ortholog_one2one 2 retrogenes
retro_hsap_3810, retro_hsap_4202,
Gorilla gorilla ENSGGOG00000001175 ortholog_one2one 1 retrogene
retro_ggor_2816,
Monodelphis domestica ENSMODG00000003104 other_paralog 1 retrogene
retro_mdom_93,
Monodelphis domestica ENSMODG00000011825 other_paralog 1 retrogene
retro_mdom_224,
Monodelphis domestica ENSMODG00000016041 within_species_paralog 1 retrogene
retro_mdom_888,
Nomascus leucogenys ENSNLEG00000001673 ortholog_one2one 1 retrogene
retro_nleu_2152,
Otolemur garnettii ENSOGAG00000006015 ortholog_one2one 1 retrogene
retro_ogar_1193,
Pongo abelii ENSPPYG00000017639 ortholog_one2many 1 retrogene
retro_pabe_3438,
Pan troglodytes ENSPTRG00000019080 ortholog_one2one 2 retrogenes
retro_ptro_2585, retro_ptro_2853,
Rattus norvegicus ENSRNOG00000006545 ortholog_one2one 9 retrogenes
retro_rnor_1424, retro_rnor_1425, retro_rnor_1426, retro_rnor_1427, retro_rnor_1428, retro_rnor_1431, retro_rnor_1445, retro_rnor_1446, retro_rnor_821,
Sarcophilus harrisii ENSSHAG00000003788 ortholog_one2one 1 retrogene
retro_shar_258,
Ictidomys tridecemlineatus ENSSTOG00000021378 ortholog_one2one 3 retrogenes
retro_itri_1332, retro_itri_1736, retro_itri_1771,
Tursiops truncatus ENSTTRG00000016197 ortholog_one2one 1 retrogene
retro_ttru_329,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1672 91.04 62.79
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Download FASTA sequences of all ENSMODG00000021167 retrocopies