Parental gene: | SEPT7, ENSG00000122545 |
| Aliases: | None |
| Description: | septin 7 [Source:HGNC Symbol;Acc:1717] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 7:35840541..35944917(+) |
>ENSG00000122545
ATGTCGGTCAGTGCGAGATCCGCTGCTGCTGAGGAGAGGAGCGTCAACAGCAGCACCATGGAGGTTGCCCAACAGAAGAA
CCTTGAAGGCTATGTGGGATTTGCCAATCTCCCAAATCAAGTATACAGAAAATCGGTGAAGAGAGGTTTTGAATTCACGC
TTATGGTAGTGGGTGAATCTGGATTGGGAAAGTCGACATTAATCAACTCATTATTCCTCACAGATTTGTATTCTCCAGAG
TATCCAGGTCCTTCTCATAGAATTAAAAAGACTGTACAGGTGGAACAATCCAAAGTTTTAATCAAAGAAGGTGGTGTTCA
GTTGCTGCTCACAATAGTTGATACCCCAGGATTTGGAGATGCAGTGGATAATAGTAATTGCTGGCAGCCTGTTATCGACT
ACATTGATAGTAAATTTGAGGACTACCTAAATGCAGAATCACGAGTGAACAGACGTCAGATGCCTGATAACAGGGTGCAG
TGTTGTTTATACTTCATTGCTCCTTCAGGACATGGACTTAAACCATTGGATATTGAGTTTATGAAGCGTTTGCATGAAAA
AGTGAATATCATCCCACTTATTGCCAAAGCAGACACACTCACACCAGAGGAATGCCAACAGTTTAAAAAACAGATAATGA
AAGAAATCCAAGAACATAAAATTAAAATATACGAATTTCCAGAAACAGATGATGAAGAAGAAAATAAACTTGTTAAAAAG
ATAAAGGACCGTTTACCTCTTGCTGTGGTAGGTAGTAATACTATCATTGAAGTTAATGGCAAAAGGGTCAGAGGAAGGCA
GTATCCTTGGGGTGTTGCTGAAGTTGAAAATGGTGAACATTGTGATTTTACAATCCTAAGAAATATGTTGATAAGAACAC
ACATGCAGGACTTGAAAGATGTTACTAATAATGTCCACTATGAGAACTACAGAAGCAGAAAACTTGCAGCTGTGACTTAT
AATGGAGTTGATAACAACAAGAATAAAGGGCAGCTGACTAAGAGCCCTCTGGCACAAATGGAAGAAGAAAGAAGGGAGCA
TGTAGCTAAAATGAAGAAGATGGAGATGGAGATGGAGCAGGTGTTTGAGATGAAGGTCAAAGAAAAAGTTCAAAAACTGA
AGGACTCTGAAGCTGAGCTCCAGCGGCGCCATGAGCAAATGAAAAAGAATTTGGAAGCACAGCACAAAGAATTGGAGGAA
AAACGTCGTCAGTTCGAGGATGAGAAAGCAAACTGGGAAGCTCAACAACGTATTTTAGAACAACAGAACTCTTCAAGAAC
CTTGGAAAAGAACAAGAAGAAAGGGAAGATCTTTTAA
ATGTCGGTCAGTGCGAGATCCGCTGCTGCTGAGGAGAGGAGCGTCAACAGCAGCACCATGGAGGTTGCCCAACAGAAGAA
CCTTGAAGGCTATGTGGGATTTGCCAATCTCCCAAATCAAGTATACAGAAAATCGGTGAAGAGAGGTTTTGAATTCACGC
TTATGGTAGTGGGTGAATCTGGATTGGGAAAGTCGACATTAATCAACTCATTATTCCTCACAGATTTGTATTCTCCAGAG
TATCCAGGTCCTTCTCATAGAATTAAAAAGACTGTACAGGTGGAACAATCCAAAGTTTTAATCAAAGAAGGTGGTGTTCA
GTTGCTGCTCACAATAGTTGATACCCCAGGATTTGGAGATGCAGTGGATAATAGTAATTGCTGGCAGCCTGTTATCGACT
ACATTGATAGTAAATTTGAGGACTACCTAAATGCAGAATCACGAGTGAACAGACGTCAGATGCCTGATAACAGGGTGCAG
TGTTGTTTATACTTCATTGCTCCTTCAGGACATGGACTTAAACCATTGGATATTGAGTTTATGAAGCGTTTGCATGAAAA
AGTGAATATCATCCCACTTATTGCCAAAGCAGACACACTCACACCAGAGGAATGCCAACAGTTTAAAAAACAGATAATGA
AAGAAATCCAAGAACATAAAATTAAAATATACGAATTTCCAGAAACAGATGATGAAGAAGAAAATAAACTTGTTAAAAAG
ATAAAGGACCGTTTACCTCTTGCTGTGGTAGGTAGTAATACTATCATTGAAGTTAATGGCAAAAGGGTCAGAGGAAGGCA
GTATCCTTGGGGTGTTGCTGAAGTTGAAAATGGTGAACATTGTGATTTTACAATCCTAAGAAATATGTTGATAAGAACAC
ACATGCAGGACTTGAAAGATGTTACTAATAATGTCCACTATGAGAACTACAGAAGCAGAAAACTTGCAGCTGTGACTTAT
AATGGAGTTGATAACAACAAGAATAAAGGGCAGCTGACTAAGAGCCCTCTGGCACAAATGGAAGAAGAAAGAAGGGAGCA
TGTAGCTAAAATGAAGAAGATGGAGATGGAGATGGAGCAGGTGTTTGAGATGAAGGTCAAAGAAAAAGTTCAAAAACTGA
AGGACTCTGAAGCTGAGCTCCAGCGGCGCCATGAGCAAATGAAAAAGAATTTGGAAGCACAGCACAAAGAATTGGAGGAA
AAACGTCGTCAGTTCGAGGATGAGAAAGCAAACTGGGAAGCTCAACAACGTATTTTAGAACAACAGAACTCTTCAAGAAC
CTTGGAAAAGAACAAGAAGAAAGGGAAGATCTTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 45 .94 RPM |
| bodymap2_lung | 245 .48 RPM |
| bodymap2_breast | 197 .71 RPM |
| bodymap2_adipose | 203 .87 RPM |
| bodymap2_adrenal | 253 .27 RPM |
| bodymap2_skeletal_muscle | 84 .26 RPM |
| bodymap2_thyroid | 187 .16 RPM |
| bodymap2_prostate | 273 .09 RPM |
| bodymap2_colon | 315 .37 RPM |
| bodymap2_testis | 298 .73 RPM |
| bodymap2_brain | 639 .14 RPM |
| bodymap2_heart | 160 .41 RPM |
| bodymap2_white_blood_cells | 302 .96 RPM |
| bodymap2_lymph_node | 253 .67 RPM |
| bodymap2_ovary | 340 .87 RPM |
| bodymap2_kidney | 155 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012276 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000015624 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000186522 | other_paralog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001175 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000021167 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001673 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006015 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000017639 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000019080 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000006545 | ortholog_one2one | 9 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000003788 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000021378 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_3810 | 90.34 | 99.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_4202 | 83.79 | 65.10 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000122545 retrocopies