Parental gene: | SEPT10, ENSPPYG00000012144 |
| Aliases: | None |
| Description: | septin-10 [Source:RefSeq peptide;Acc:NP_001127203] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 2a:18000183..18043455(-) |
>ENSPPYG00000012144
ATGTCTGGCCATGTTGGTTTTGAGAGTTTGCCTGATCAGCTGGTGAACAGATCCATTCAGCAAGGTTTCTGCTTTAATAT
TCTCTGTGTGGGGGAAACTGGAATTGGAAAATCAACATTGATTGACACATTGTTTAATACTAATTTTGAAGACTATGAAT
CCTCACATTTTTGCCCAAATGTTAAACTTAAAGCTCAGACATATGAACTCCAGGAAAGTAATGTTCAATTGAAATTGACC
ATTGTGAATACAGTGGGATTTGGTGACCAAATAAATAAAGAAGAGAGCTACCAACCGATAGTTGACTACATAGATGCTCA
GTTTGAGGCCTATCTCCAAGAAGAACTGAAGATTAAGCGTTCTCTCTTTACCTACCATGATTCTCGCATCCATGTGTGCC
TCTACTTCATTTCACCGACAGGCCACTCTCTGAAGACACTTGATCTCTTAACCATGAAGAACCTTGACAGCAAGGTAAAC
ATTATACCAGTGATTGCCAAAGCAGATACGGTTTCTAAAACTGAATTACAGAAGTTTAAGATCAAGCTCATGAGTGAATT
GGTCAGCAATGGCGTCCAGATATACCAGTTCCCAACGGATGATGACACTATTGCTAAGGTCAACGCTGCAATGAATGGAC
AGTTGCCGTTTGCTGTTGTGGGAAGTATGGATGAGGTAAAAGTCGGAAACAAGATGGTCAAAGCTCGCCAGTACCCTTGG
GGTGTTGTACAAGTGGAAAATGAAAACCACTGTGACTTTGTAAAGCTGCGGGAAATGCTCATTTGTACAAATATGGAGGA
CCTGCGAGAGCAGACCCATACCAGGCACTATGAGCTTTACAGGCGCTGCAAACTGGAGGAAATGGGCTTTACAGATGTGG
GCCCAGAAAACAAGCCGGTCAGTCTTCAAGAGACCTATGAAGCCAAAAGACATGAGTTCCATGGTGAACGTCAGAGGAAG
GAAGAAGAAATGAAACAGATGTTTGTGCAGCGAGTAAAGGAGAAAGAAGCCATATTGAAAGAAGCTGAGAGAGAGCTACA
GGCCAAATTTGAGCACCTTAAGAGACTTCACCAAGAAGAGAGAATGAAGCTTGAAGAAAAGAGAAAACTTTTGGAAGAAG
AAATAATTGCTTTCTCTAAAAAGAAAGCTACCTCCGAGATATTTCACAGCCAGTCCTTTCTGGCAACAGGCAGCAACCTG
AGGAAGGACAAGGACCGTAAGAACTCCAATTTTTTGTAA
ATGTCTGGCCATGTTGGTTTTGAGAGTTTGCCTGATCAGCTGGTGAACAGATCCATTCAGCAAGGTTTCTGCTTTAATAT
TCTCTGTGTGGGGGAAACTGGAATTGGAAAATCAACATTGATTGACACATTGTTTAATACTAATTTTGAAGACTATGAAT
CCTCACATTTTTGCCCAAATGTTAAACTTAAAGCTCAGACATATGAACTCCAGGAAAGTAATGTTCAATTGAAATTGACC
ATTGTGAATACAGTGGGATTTGGTGACCAAATAAATAAAGAAGAGAGCTACCAACCGATAGTTGACTACATAGATGCTCA
GTTTGAGGCCTATCTCCAAGAAGAACTGAAGATTAAGCGTTCTCTCTTTACCTACCATGATTCTCGCATCCATGTGTGCC
TCTACTTCATTTCACCGACAGGCCACTCTCTGAAGACACTTGATCTCTTAACCATGAAGAACCTTGACAGCAAGGTAAAC
ATTATACCAGTGATTGCCAAAGCAGATACGGTTTCTAAAACTGAATTACAGAAGTTTAAGATCAAGCTCATGAGTGAATT
GGTCAGCAATGGCGTCCAGATATACCAGTTCCCAACGGATGATGACACTATTGCTAAGGTCAACGCTGCAATGAATGGAC
AGTTGCCGTTTGCTGTTGTGGGAAGTATGGATGAGGTAAAAGTCGGAAACAAGATGGTCAAAGCTCGCCAGTACCCTTGG
GGTGTTGTACAAGTGGAAAATGAAAACCACTGTGACTTTGTAAAGCTGCGGGAAATGCTCATTTGTACAAATATGGAGGA
CCTGCGAGAGCAGACCCATACCAGGCACTATGAGCTTTACAGGCGCTGCAAACTGGAGGAAATGGGCTTTACAGATGTGG
GCCCAGAAAACAAGCCGGTCAGTCTTCAAGAGACCTATGAAGCCAAAAGACATGAGTTCCATGGTGAACGTCAGAGGAAG
GAAGAAGAAATGAAACAGATGTTTGTGCAGCGAGTAAAGGAGAAAGAAGCCATATTGAAAGAAGCTGAGAGAGAGCTACA
GGCCAAATTTGAGCACCTTAAGAGACTTCACCAAGAAGAGAGAATGAAGCTTGAAGAAAAGAGAAAACTTTTGGAAGAAG
AAATAATTGCTTTCTCTAAAAAGAAAGCTACCTCCGAGATATTTCACAGCCAGTCCTTTCTGGCAACAGGCAGCAACCTG
AGGAAGGACAAGGACCGTAAGAACTCCAATTTTTTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 3 .21 RPM |
| SRP007412_cerebellum | 2 .55 RPM |
| SRP007412_heart | 16 .47 RPM |
| SRP007412_kidney | 17 .63 RPM |
| SRP007412_liver | 16 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000017754 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000186522 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000013659 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017273 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001328 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000017639 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3335 | 92.60 | 74.76 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000012144 retrocopies