Parental gene: | ENSPPYG00000011205 |
| Aliases: | None |
| Description: | None |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 20:60678857..60679980(+) |
>ENSPPYG00000011205
ATGCAGAACGACGCCGGCGAGTTCGTGGACCTGTACGTGCCGCGGAAATGCTCCGCTAGCAATCGCATCATCGGTGCCAA
GGACCACGCATCCATCCAGATGAACGTGGCCGAGGTTGACAAGGTCACAGGCAGGTTTAATGGCCAGTTTAAAACTTACG
CTATCTGCGGGGCCATTCGTAGGATGGGTGAGTCAGATGATTCCATTCTCCGATTGGCCAAGGCCGATGGCATCGTCTCA
AAGAACTTTTGA
ATGCAGAACGACGCCGGCGAGTTCGTGGACCTGTACGTGCCGCGGAAATGCTCCGCTAGCAATCGCATCATCGGTGCCAA
GGACCACGCATCCATCCAGATGAACGTGGCCGAGGTTGACAAGGTCACAGGCAGGTTTAATGGCCAGTTTAAAACTTACG
CTATCTGCGGGGCCATTCGTAGGATGGGTGAGTCAGATGATTCCATTCTCCGATTGGCCAAGGCCGATGGCATCGTCTCA
AAGAACTTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017399 | possible_ortholog | 2 retrogenes | |
| Bos taurus | ENSBTAG00000020795 | possible_ortholog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000012676 | possible_ortholog | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000014195 | possible_ortholog | 5 retrogenes | |
| Cavia porcellus | ENSCPOG00000001965 | possible_ortholog | 4 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000004573 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000171858 | possible_ortholog | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023745 | possible_ortholog | 7 retrogenes | |
| Latimeria chalumnae | ENSLACG00000012753 | ortholog_many2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000015793 | possible_ortholog | 4 retrogenes | |
| Macropus eugenii | ENSMEUG00000015832 | possible_ortholog | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000012997 | possible_ortholog | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000000346 | possible_ortholog | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000005006 | possible_ortholog | 8 retrogenes | |
| Monodelphis domestica | ENSMODG00000016769 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000039001 | possible_ortholog | 11 retrogenes | |
| Ornithorhynchus anatinus | ENSOANG00000003361 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016673 | possible_ortholog | 12 retrogenes | |
| Ochotona princeps | ENSOPRG00000000937 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013708 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000003548 | possible_ortholog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000006325 | possible_ortholog | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000021825 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000001029 | possible_ortholog | 5 retrogenes | |
| Tarsius syrichta | ENSTSYG00000007061 | possible_ortholog | 5 retrogenes | |
| Tursiops truncatus | ENSTTRG00000011105 | possible_ortholog | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_157 | 74.36 | 93.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_365 | 65.00 | 96.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_710 | 67.86 | 66.27 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_986 | 65.67 | 78.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_1562 | 73.58 | 63.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_2446 | 73.17 | 98.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_2505 | 90.36 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_pabe_3503 | 70.13 | 92.77 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000011205 retrocopies