Parental gene:

MMU.1392, ENSMMUG00000011853

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:6:73911698..73995728(-)


>ENSMMUG00000011853
ATGGCCGAACCTCGCGTGAGACAGATCAAGATCAAGACCGGCGTGGTGAAGCGGTTGGTCAAAGAAAAAGTGATGTATGA
AAAAGAGGCAAAACAACAGGAAGAAAAGATTGAAAAAATGAGAGCTGAAGATGGTGAAAATTATGACATTAAAAAGCAGG
TAGAGATCCTACAAGAATCCCGGATGATGATCCCAGATTGCCAGCGCAGGTTGGAAGCCGCATATTTGGATCTTCAACAG
ATATTAGAATGTGAAAAAGACTTGGAAGAAACTGAGGAATATAAAGAAGCACGTTTAGTACTGGATTCAGTGAAGTTAGA
AGCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 13 .17 RPM
SRP007412_brain 1 .68 RPM
SRP007412_cerebellum 1 .42 RPM
SRP007412_heart 1 .53 RPM
SRP007412_kidney 1 .41 RPM
SRP007412_liver 1 .15 RPM
SRP007412_testis 3 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014223 ortholog_many2many 4 retrogenes
retro_acar_11, retro_acar_130, retro_acar_142, retro_acar_195,
Choloepus hoffmanni ENSCHOG00000002112 possible_ortholog 2 retrogenes
retro_chof_1592, retro_chof_304,
Callithrix jacchus ENSCJAG00000019848 possible_ortholog 4 retrogenes
retro_cjac_114, retro_cjac_2160, retro_cjac_2173, retro_cjac_2974,
Cavia porcellus ENSCPOG00000012187 ortholog_one2many 1 retrogene
retro_cpor_930,
Echinops telfairi ENSETEG00000016572 ortholog_one2many 1 retrogene
retro_etel_93,
Homo sapiens ENSG00000171530 ortholog_one2many 3 retrogenes
retro_hsap_3065, retro_hsap_346, retro_hsap_4667,
Loxodonta africana ENSLAFG00000005316 possible_ortholog 1 retrogene
retro_lafr_1212,
Mus musculus ENSMUSG00000042043 ortholog_one2many 3 retrogenes
retro_mmus_1486, retro_mmus_2839, retro_mmus_2970,
Otolemur garnettii ENSOGAG00000010198 ortholog_one2many 1 retrogene
retro_ogar_3193,
Ochotona princeps ENSOPRG00000002460 ortholog_one2many 4 retrogenes
retro_opri_550, retro_opri_727, retro_opri_879, retro_opri_91,
Procavia capensis ENSPCAG00000011849 possible_ortholog 1 retrogene
retro_pcap_394,
Pongo abelii ENSPPYG00000015579 ortholog_one2many 2 retrogenes
retro_pabe_2540, retro_pabe_350,
Pan troglodytes ENSPTRG00000017013 ortholog_one2many 2 retrogenes
retro_ptro_2067, retro_ptro_274,
Rattus norvegicus ENSRNOG00000048342 ortholog_many2many 1 retrogene
retro_rnor_140,
Sorex araneus ENSSARG00000009943 ortholog_one2many 1 retrogene
retro_sara_699,
Ictidomys tridecemlineatus ENSSTOG00000009840 possible_ortholog 1 retrogene
retro_itri_246,
Tupaia belangeri ENSTBEG00000006034 possible_ortholog 6 retrogenes
retro_tbel_1073, retro_tbel_113, retro_tbel_1286, retro_tbel_2336, retro_tbel_2905, retro_tbel_756,
Tarsius syrichta ENSTSYG00000000514 possible_ortholog 1 retrogene
retro_tsyr_1038,
Vicugna pacos ENSVPAG00000001561 possible_ortholog 1 retrogene
retro_vpac_277,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_229 100.00 100.00
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Download FASTA sequences of all ENSMMUG00000011853 retrocopies