Parental gene: | TBCA, ENSOPRG00000002460 |
| Aliases: | None |
| Description: | tubulin folding cofactor A [Source:HGNC Symbol;Acc:11579] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_4040:1019..23165(-) |
>ENSOPRG00000002460
CCGGCCCCTCCCTCCGCGCCTGCGCGCCCGCCGCCCGAGCCCCGGCGCCCCGCCCCTGCTCGTCGCGGCGCTGGGGCCAT
GGCCGACCCTCGTGTGCGGCAGATCAAGATCAAGACCGGCGTGGTGAAGCGATTGGTCAAAGAAAAAGTGATGTACGAGA
AGGAAGCAAAACAGCAAGAAGAAAAGATTGAAAAGATGAAAGCTGAAGACGGTGAAAATTATGCCATTAAGAAGCAGGCC
GAGATCCTGCAGGAGTCGCGCATGATGATCCCCGACTGCCAGCGCAGGCTGGAGGCTGCCTACGCCGACCTGCAGCAGGA
AAGTGAAAAAGACTTGGAAGAAGCTGAAGAGTATAAAGAAGCACGGGTGGTCCTGGACTCAGTGAAGCTGGAAGCC
CCGGCCCCTCCCTCCGCGCCTGCGCGCCCGCCGCCCGAGCCCCGGCGCCCCGCCCCTGCTCGTCGCGGCGCTGGGGCCAT
GGCCGACCCTCGTGTGCGGCAGATCAAGATCAAGACCGGCGTGGTGAAGCGATTGGTCAAAGAAAAAGTGATGTACGAGA
AGGAAGCAAAACAGCAAGAAGAAAAGATTGAAAAGATGAAAGCTGAAGACGGTGAAAATTATGCCATTAAGAAGCAGGCC
GAGATCCTGCAGGAGTCGCGCATGATGATCCCCGACTGCCAGCGCAGGCTGGAGGCTGCCTACGCCGACCTGCAGCAGGA
AAGTGAAAAAGACTTGGAAGAAGCTGAAGAGTATAAAGAAGCACGGGTGGTCCTGGACTCAGTGAAGCTGGAAGCC
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000014223 | ortholog_one2many | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000019848 | possible_ortholog | 4 retrogenes | |
| Cavia porcellus | ENSCPOG00000012187 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000016572 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000171530 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000011853 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000042043 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000010198 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015579 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000017013 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000048342 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000009943 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000009840 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000006034 | ortholog_one2one | 6 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000514 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_91 | 74.17 | 87.88 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_550 | 74.59 | 89.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_727 | 95.08 | 90.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_opri_879 | 74.17 | 87.88 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000002460 retrocopies