Parental gene: | Tbca, ENSMUSG00000042043 |
| Aliases: | Tbca, Tbca13 |
| Description: | tubulin cofactor A [Source:MGI Symbol;Acc:MGI:107549] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 13:94788942..94842899(+) |
>ENSMUSG00000042043
ATGGCCGATCCTCGCGTGAGGCAGATCAAGATCAAGACCGGAGTAGTGAGGCGATTGGTCAAAGAAAGAGTGATGTACGA
AAAAGAAGCAAAGCAGCAAGAAGAAAAGATTGAAAAAATGAAGGCTGAAGATGGAGAGAACTACGCCATTAAGAAGCAGG
CAGAGATCCTGCAAGAGTCCCGGATGATGATCCCAGATTGCCAGCGTCGGTTAGAGGCTGCATATACTGATCTTCAGCAG
ATATTAGAAAGTGAAAAAGACTTGGAAGAAGCCGAGGAGTATAAAGAAGCCCGTGTAGTGCTGGATTCCGTAAAGCTAGA
AGCCTGA
ATGGCCGATCCTCGCGTGAGGCAGATCAAGATCAAGACCGGAGTAGTGAGGCGATTGGTCAAAGAAAGAGTGATGTACGA
AAAAGAAGCAAAGCAGCAAGAAGAAAAGATTGAAAAAATGAAGGCTGAAGATGGAGAGAACTACGCCATTAAGAAGCAGG
CAGAGATCCTGCAAGAGTCCCGGATGATGATCCCAGATTGCCAGCGTCGGTTAGAGGCTGCATATACTGATCTTCAGCAG
ATATTAGAAAGTGAAAAAGACTTGGAAGAAGCCGAGGAGTATAAAGAAGCCCGTGTAGTGCTGGATTCCGTAAAGCTAGA
AGCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 15 .65 RPM |
| SRP007412_cerebellum | 13 .98 RPM |
| SRP007412_heart | 16 .47 RPM |
| SRP007412_kidney | 30 .09 RPM |
| SRP007412_liver | 33 .13 RPM |
| SRP007412_testis | 41 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000014223 | ortholog_one2many | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000019848 | possible_ortholog | 4 retrogenes | |
| Cavia porcellus | ENSCPOG00000012187 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000016572 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000171530 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000011853 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010198 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000002460 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000015579 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000017013 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000048342 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000009943 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000009840 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000006034 | ortholog_one2one | 6 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000514 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1486 | 96.30 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2839 | 91.30 | 63.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_2970 | 86.76 | 62.04 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000042043 retrocopies