Parental gene: | TBCA, ENSG00000171530 |
| Aliases: | None |
| Description: | tubulin folding cofactor A [Source:HGNC Symbol;Acc:11579] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 5:76986990..77164604(-) |
>ENSG00000171530
ATGGCCGATCCTCGCGTGAGACAGATCAAGATCAAGACCGGCGTGGTGAAGCGGTTGGTCAAAGAAAAAGTGATGTATGA
AAAAGAGGCAAAACAACAAGAAGAAAAGATTGAAAAAATGAGAGCTGAAGACGGTGAAAATTATGACATTAAAAAGCAGG
CAGAGATCCTACAAGAATCCAGGATGATGATCCCAGATTGCCAGCGCAGGTTGGAAGCCGCATATTTGGATCTTCAACGG
ATACTAGAAAATGAAAAAGACTTGGAAGAAGCTGAGGAATATAAAGAAGCACGTTTAGTACTGGATTCAGTGAAGTTAGA
AGCCTGA
ATGGCCGATCCTCGCGTGAGACAGATCAAGATCAAGACCGGCGTGGTGAAGCGGTTGGTCAAAGAAAAAGTGATGTATGA
AAAAGAGGCAAAACAACAAGAAGAAAAGATTGAAAAAATGAGAGCTGAAGACGGTGAAAATTATGACATTAAAAAGCAGG
CAGAGATCCTACAAGAATCCAGGATGATGATCCCAGATTGCCAGCGCAGGTTGGAAGCCGCATATTTGGATCTTCAACGG
ATACTAGAAAATGAAAAAGACTTGGAAGAAGCTGAGGAATATAAAGAAGCACGTTTAGTACTGGATTCAGTGAAGTTAGA
AGCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 60 .54 RPM |
| bodymap2_lung | 49 .42 RPM |
| bodymap2_breast | 51 .83 RPM |
| bodymap2_adipose | 45 .42 RPM |
| bodymap2_adrenal | 52 .65 RPM |
| bodymap2_skeletal_muscle | 37 .94 RPM |
| bodymap2_thyroid | 67 .85 RPM |
| bodymap2_prostate | 80 .92 RPM |
| bodymap2_colon | 79 .16 RPM |
| bodymap2_testis | 72 .26 RPM |
| bodymap2_brain | 58 .83 RPM |
| bodymap2_heart | 30 .98 RPM |
| bodymap2_white_blood_cells | 49 .08 RPM |
| bodymap2_lymph_node | 48 .99 RPM |
| bodymap2_ovary | 75 .41 RPM |
| bodymap2_kidney | 94 .78 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000014223 | ortholog_one2many | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000019848 | possible_ortholog | 4 retrogenes | |
| Cavia porcellus | ENSCPOG00000012187 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000016572 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011853 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000042043 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000010198 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000002460 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000015579 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000017013 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000048342 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000009943 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_346 | 83.16 | 79.83 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_3065 | 72.06 | 57.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_4667 | 97.22 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000171530 retrocopies