Parental gene:

UBE2C, ENSMEUG00000007177

Aliases:None
Description:ubiquitin-conjugating enzyme E2C [Source:HGNC Symbol;Acc:15937]
Organism:Wallaby (Macropus eugenii)
Coordinates:GeneScaffold_1760:19089..21427(+)


>ENSMEUG00000007177
ATGGCCTCGCAGAATCGTGACCCAGCCGCCGCCAGCGCCGCCGCCGCCCGGAAGGGGGCCGAGCCTGGGACGAGCGCAGC
CCGCGGGTCCGTAGGCAAGAGGTTACAGCAGGAATTGATGACCCTAATGATGTCTGGAGACAAAGGAATTTCTGCCTTCC
CAGAGTCAGACAATCTCTTCAAGTGGGTTGGGACCATCCATGGGGCAGCTGGGACAGTGTATGAAGACCTAAGGTACAAG
CTCTCCCTGGAATTCCCCAGCGGCTACCCATACAATGCTCCCACGGTGAAATTTGTCACACCTTGTTACCATCCCAATGT
GGACACCCAAGGCAATATCTGTTTGGACATCCTCAAGGACAAGTGGTCAGCTCTGTATGATGTCAGGACCATCCTGCTAT
CTATCCAGAGCCTGCTGGGAGAACCCAACATTGACAGCCCATTGAACACACATGCTGCTGAACTTTGGACAAACCCCACA
GCTTTTAAAAAGTACCTGCAGGAAGCATATATGAAGCAGGAAACTAGCAAACATCCTGAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012547 ortholog_one2one 5 retrogenes
retro_amel_1122, retro_amel_1353, retro_amel_157, retro_amel_1621, retro_amel_635,
Bos taurus ENSBTAG00000016746 ortholog_one2one 1 retrogene
retro_btau_249,
Canis familiaris ENSCAFG00000009745 ortholog_one2one 6 retrogenes
retro_cfam_1031, retro_cfam_1805, retro_cfam_1878, retro_cfam_2078, retro_cfam_290, retro_cfam_356,
Cavia porcellus ENSCPOG00000014102 ortholog_one2many 2 retrogenes
retro_cpor_1007, retro_cpor_211,
Dipodomys ordii ENSDORG00000011774 ortholog_one2one 4 retrogenes
retro_dord_157, retro_dord_386, retro_dord_421, retro_dord_84,
Equus caballus ENSECAG00000014619 ortholog_one2one 2 retrogenes
retro_ecab_297, retro_ecab_316,
Erinaceus europaeus ENSEEUG00000010643 ortholog_one2one 14 retrogenes
retro_eeur_113, retro_eeur_177, retro_eeur_249, retro_eeur_253, retro_eeur_266, retro_eeur_272, retro_eeur_294, retro_eeur_346, retro_eeur_375, retro_eeur_518, retro_eeur_592, retro_eeur_604, retro_eeur_641, retro_eeur_80,
Felis catus ENSFCAG00000001885 ortholog_one2one 4 retrogenes
retro_fcat_1440, retro_fcat_1530, retro_fcat_1667, retro_fcat_1734,
Homo sapiens ENSG00000175063 ortholog_one2one 3 retrogenes
retro_hsap_1474, retro_hsap_1922, retro_hsap_2935,
Gorilla gorilla ENSGGOG00000026061 ortholog_one2one 3 retrogenes
retro_ggor_1130, retro_ggor_1402, retro_ggor_2035,
Loxodonta africana ENSLAFG00000003164 ortholog_one2many 1 retrogene
retro_lafr_73,
Microcebus murinus ENSMICG00000011218 ortholog_one2one 2 retrogenes
retro_mmur_332, retro_mmur_988,
Myotis lucifugus ENSMLUG00000006715 ortholog_one2one 4 retrogenes
retro_mluc_2164, retro_mluc_2220, retro_mluc_600, retro_mluc_636,
Macaca mulatta ENSMMUG00000021023 ortholog_one2many 4 retrogenes
retro_mmul_1345, retro_mmul_170, retro_mmul_1951, retro_mmul_777,
Monodelphis domestica ENSMODG00000013661 ortholog_one2one 6 retrogenes
retro_mdom_1549, retro_mdom_1552, retro_mdom_1732, retro_mdom_1970, retro_mdom_2020, retro_mdom_415,
Mustela putorius furo ENSMPUG00000017619 ortholog_one2many 2 retrogenes
retro_mputfur_103, retro_mputfur_189,
Mus musculus ENSMUSG00000001403 ortholog_one2one 5 retrogenes
retro_mmus_1344, retro_mmus_1593, retro_mmus_1770, retro_mmus_2881, retro_mmus_3512,
Oryctolagus cuniculus ENSOCUG00000012176 ortholog_one2one 3 retrogenes
retro_ocun_1005, retro_ocun_1294, retro_ocun_348,
Otolemur garnettii ENSOGAG00000004989 ortholog_one2many 3 retrogenes
retro_ogar_2347, retro_ogar_249, retro_ogar_3067,
Ochotona princeps ENSOPRG00000014284 ortholog_one2one 4 retrogenes
retro_opri_1009, retro_opri_1055, retro_opri_222, retro_opri_50,
Pongo abelii ENSPPYG00000011071 ortholog_one2one 4 retrogenes
retro_pabe_1155, retro_pabe_1221, retro_pabe_1589, retro_pabe_2519,
Pan troglodytes ENSPTRG00000013564 ortholog_one2many 1 retrogene
retro_ptro_38,
Pteropus vampyrus ENSPVAG00000000369 ortholog_one2one 1 retrogene
retro_pvam_423,
Rattus norvegicus ENSRNOG00000015131 ortholog_one2one 5 retrogenes
retro_rnor_1390, retro_rnor_2131, retro_rnor_2470, retro_rnor_719, retro_rnor_864,
Sus scrofa ENSSSCG00000007423 ortholog_one2one 1 retrogene
retro_sscr_643,
Tursiops truncatus ENSTTRG00000015987 ortholog_one2one 1 retrogene
retro_ttru_1752,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_meug_145 91.06 67.78
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2. retro_meug_334 80.65 68.89
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3. retro_meug_645 87.15 99.44
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4. retro_meug_1021 74.17 65.56
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5. retro_meug_1128 85.79 99.44
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6. retro_meug_1203 88.46 100.00
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7. retro_meug_1398 79.10 97.22
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8. retro_meug_1435 88.48 91.11
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9. retro_meug_1476 87.58 81.11
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10. retro_meug_1504 92.97 70.56
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11. retro_meug_1575 87.82 86.11
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12. retro_meug_1773 77.08 53.33
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13. retro_meug_1808 80.17 64.44
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14. retro_meug_2034 62.50 65.00
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Download FASTA sequences of all ENSMEUG00000007177 retrocopies